Miyakogusa Predicted Gene

Lj6g3v1946540.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1946540.1 Non Chatacterized Hit- tr|I1M1I5|I1M1I5_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,88.17,0,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat; seg,NULL;
PENTATRICOPEPTIDE (PPR) REP,CUFF.60263.1
         (1830 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP053476 similar to UniRef100_A7Q1A2 Cluster: Chromosom...   870   0.0  

>gnl|LJGI|BP053476 similar to UniRef100_A7Q1A2 Cluster: Chromosome chr10 scaffold_43,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr10 scaffold_43, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (23%)
          Length = 514

 Score =  870 bits (439), Expect = 0.0
 Identities = 460/467 (98%)
 Strand = Plus / Minus

                                                                        
Query: 1364 gttggacagatgtacaaacaattaggaagtcgatgctgcaggatggcgttaagaaaaccc 1423
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514  gttggacagatgtacaaacaattaggaagtcgatgctgcaggatggcgttaagaaaaccc 455

                                                                        
Query: 1424 ctggctatagtcttgttgagttgggcaaccgtgtttatgaatttaccatgggtgatagat 1483
            |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 454  ctggctatagtcttgttgagttggccaaccgtgtttatgaatttaccctgggtgatagat 395

                                                                        
Query: 1484 ctcatcctcaaagtcaggatgtatatgcactgctagagaagattacagaattgttgaagt 1543
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394  ctcatcctcaaagtcaggatgtatatgcactgctagagaagattacagaattgttgaagt 335

                                                                        
Query: 1544 tagaaggctatgtgcctcgtacagaaaatgtgcttgcggacatagaggaagaggagaaag 1603
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334  tagaaggctatgtgcctcgtacagaaaatgtgcttgcggacatagaggaagaggagaaag 275

                                                                        
Query: 1604 aacaagctttgtcttatcacagtgaaaaagttgcaatagctttcatgctcttaaatacag 1663
            ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 274  aaccagctttgtcttatcacagtgaaaaagttgccatagctttcatgctcttaaatacag 215

                                                                        
Query: 1664 caccagggaccccaatcagagtcatgaagaatttaagagtttgtgcagattgtcatatgg 1723
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214  caccagggacccccatcagagtcatgaagaatttaagagtttgtgcagattgtcatatgg 155

                                                                        
Query: 1724 ctatcaaactcatatcaaaagtttatgatagagagattgttatcagggatcgaagtcggt 1783
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154  ctatccaactcatatcaaaagtttatgatagagagattgttatcagggatcgaagtcggt 95

                                                           
Query: 1784 ttcaccattttagaggtggtaaatgttcctgtaaagattactggtaa 1830
            |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 94   ttcacccttttagaggtggtaaatgttcctgtaaagattactggtaa 48