Miyakogusa Predicted Gene
- Lj6g3v1946420.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1946420.1 Non Chatacterized Hit- tr|I1M1H9|I1M1H9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51086
PE,54.83,0,coiled-coil,NULL; TCP,Transcription factor, TCP; seg,NULL;
TCP,Transcription factor TCP subgroup; R,,CUFF.60279.1
(1249 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80005 similar to UniRef100_Q0D8K4 Cluster: Os07g01520... 1378 0.0
gnl|LJGI|TC81016 similar to UniRef100_A7Q165 Cluster: Chromosome... 1041 0.0
gnl|LJGI|AV416048 homologue to UniRef100_A7Q165 Cluster: Chromos... 159 5e-38
gnl|LJGI|TC66739 homologue to UniRef100_A7Q165 Cluster: Chromoso... 70 4e-11
>gnl|LJGI|TC80005 similar to UniRef100_Q0D8K4 Cluster: Os07g0152000 protein; n=2;
Oryza sativa|Rep: Os07g0152000 protein - Oryza sativa
subsp. japonica (Rice), partial (27%)
Length = 697
Score = 1378 bits (695), Expect = 0.0
Identities = 695/695 (100%)
Strand = Plus / Plus
Query: 15 gattcaagaacaggtttctaagttcccaagaattgaaaatggcaccactttccaaagtag 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gattcaagaacaggtttctaagttcccaagaattgaaaatggcaccactttccaaagtag 62
Query: 75 cagctggcacaacaactcttcaagaatagtgagggtgtctagagcctctggtggcaaaga 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 cagctggcacaacaactcttcaagaatagtgagggtgtctagagcctctggtggcaaaga 122
Query: 135 caggcacagcaaggtgatgacttctaaggggttaagggatagaagagttaggctctcagt 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 caggcacagcaaggtgatgacttctaaggggttaagggatagaagagttaggctctcagt 182
Query: 195 gtccacagctattcagttctatgaccttcaagatcgcttgggtgttgaccagccaagcaa 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gtccacagctattcagttctatgaccttcaagatcgcttgggtgttgaccagccaagcaa 242
Query: 255 agctgtggactggttaatcaaagctgctgaagatgctatctcagagctcccttctctcaa 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 agctgtggactggttaatcaaagctgctgaagatgctatctcagagctcccttctctcaa 302
Query: 315 caaccttttccctgaaaccccacagcaacaaagtgatcatgagaatcagaacctgaacca 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 caaccttttccctgaaaccccacagcaacaaagtgatcatgagaatcagaacctgaacca 362
Query: 375 gaatcttaactccttgtccaaatctgcttgcagcagcaattctgagacaagcaaaggctc 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gaatcttaactccttgtccaaatctgcttgcagcagcaattctgagacaagcaaaggctc 422
Query: 435 tggtggcttgtccctctcgcggtgtgagaatcgcgtcaaggcgagggagagggcaaggga 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tggtggcttgtccctctcgcggtgtgagaatcgcgtcaaggcgagggagagggcaaggga 482
Query: 495 aagagcagcaaaggagaaagagaatgagtcaagcattgcacacaatgtaaacaacaacca 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 aagagcagcaaaggagaaagagaatgagtcaagcattgcacacaatgtaaacaacaacca 542
Query: 555 ccaccacatgtctcaaactgcttctttcactgagctactcactggtggaattggaagcac 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ccaccacatgtctcaaactgcttctttcactgagctactcactggtggaattggaagcac 602
Query: 615 agtgacagttcccaccaccacagctagtcccactgggtcagttcatcaaacacatggtgg 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 agtgacagttcccaccaccacagctagtcccactgggtcagttcatcaaacacatggtgg 662
Query: 675 ccatcatcaatggtcttcaactgtaactccaatgg 709
|||||||||||||||||||||||||||||||||||
Sbjct: 663 ccatcatcaatggtcttcaactgtaactccaatgg 697
>gnl|LJGI|TC81016 similar to UniRef100_A7Q165 Cluster: Chromosome chr10 scaffold_43,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr10 scaffold_43, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 815
Score = 1041 bits (525), Expect = 0.0
Identities = 531/533 (99%)
Strand = Plus / Plus
Query: 717 cagctctggccttctgatgggacattcatcttcaagaactcatcaatcttcttcctcttc 776
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2 cagctctggccttctgatgggacattcatcctcaagaactcatcaatcttcttcctcttc 61
Query: 777 ttcttcatctcctggattctcagggcaaatccaattaggacattcacttccggtttcacc 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ttcttcatctcctggattctcagggcaaatccaattaggacattcacttccggtttcacc 121
Query: 837 gttcagcggcgaaaaccactcagatcagatgcagcgtttctccttcatgcctgaacatct 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 122 gttcagcggcgaaaaccactcagatcagatgcagcgtttctccttcatgcctgaacacct 181
Query: 897 gatggttacttcatcttcttgttctactcagcctagcgggatcagtgactacaatctcaa 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gatggttacttcatcttcttgttctactcagcctagcgggatcagtgactacaatctcaa 241
Query: 957 cttcaccatatctcctggccttgctgctggttacaatagggggacccttcagtccaattc 1016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 cttcaccatatctcctggccttgctgctggttacaatagggggacccttcagtccaattc 301
Query: 1017 accgtctcttttgcctcatcatcaccatctgcagaggttttcttcttcacaagtagacgg 1076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 accgtctcttttgcctcatcatcaccatctgcagaggttttcttcttcacaagtagacgg 361
Query: 1077 ttcatcatccaataacaatctacctttcttcatgggaggagctgctgctgctccttcaac 1136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttcatcatccaataacaatctacctttcttcatgggaggagctgctgctgctccttcaac 421
Query: 1137 catggaaaaccatcaccaccttcaattctcacctctcttcgatggccgcttgcaactttg 1196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 catggaaaaccatcaccaccttcaattctcacctctcttcgatggccgcttgcaactttg 481
Query: 1197 ctacggcgacggaagcagaaactcagaccagaaggggaaaggcaagaactgat 1249
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ctacggcgacggaagcagaaactcagaccagaaggggaaaggcaagaactgat 534
>gnl|LJGI|AV416048 homologue to UniRef100_A7Q165 Cluster: Chromosome chr10
scaffold_43, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome chr10 scaffold_43, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (21%)
Length = 409
Score = 159 bits (80), Expect = 5e-38
Identities = 149/172 (86%)
Strand = Plus / Plus
Query: 112 tctagagcctctggtggcaaagacaggcacagcaaggtgatgacttctaaggggttaagg 171
|||||||| ||||| || |||||||||||||||||||| |||||||| ||||| | |||
Sbjct: 122 tctagagcatctggggggaaagacaggcacagcaaggtcatgacttcaaagggttcaaga 181
Query: 172 gatagaagagttaggctctcagtgtccacagctattcagttctatgaccttcaagatcgc 231
|| ||||| |||||||| || || ||||||||||||||||||||||||||||||||||
Sbjct: 182 gacagaagggttaggctatctgttaccacagctattcagttctatgaccttcaagatcga 241
Query: 232 ttgggtgttgaccagccaagcaaagctgtggactggttaatcaaagctgctg 283
|||||| |||||||||||| |||||||| || ||||| || ||| ||||||
Sbjct: 242 ttgggttatgaccagccaagtaaagctgtagagtggttgataaaatctgctg 293
>gnl|LJGI|TC66739 homologue to UniRef100_A7Q165 Cluster: Chromosome chr10 scaffold_43,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr10 scaffold_43, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 1229
Score = 69.9 bits (35), Expect = 4e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 981 tgctggttacaatagggggacccttcagtccaattcaccgtct 1023
|||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 701 tgctggtttcaatagggggacccttcagtccaattctccgtct 743
Score = 54.0 bits (27), Expect = 2e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 388 ttgtccaaatctgcttgcagcagcaattctgagacaagcaaaggctctggt 438
||||| ||||||| ||| ||||||| || |||||||||||||||||||||
Sbjct: 42 ttgtcaaaatctggttgtagcagcacctcagagacaagcaaaggctctggt 92
Score = 52.0 bits (26), Expect = 9e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 469 gtcaaggcgagggagagggcaagggaaagagcagcaaaggagaaagagaa 518
|||||||| || ||||| |||||||||||||| | ||||||||||||||
Sbjct: 129 gtcaaggctagagagagagcaagggaaagagcttccaaggagaaagagaa 178