Miyakogusa Predicted Gene
- Lj6g3v1946390.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1946390.2 Non Chatacterized Hit- tr|B8LPZ5|B8LPZ5_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,30.79,3e-18,KH_1,K Homology domain, type 1; no description,NULL;
seg,NULL; Eukaryotic type KH-domain (KH-domain ,CUFF.60252.2
(1830 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80712 similar to UniRef100_A7Q161 Cluster: Chromosome... 1334 0.0
gnl|LJGI|TC64242 similar to UniRef100_A7Q161 Cluster: Chromosome... 1166 0.0
gnl|LJGI|TC79593 similar to UniRef100_A7Q161 Cluster: Chromosome... 587 e-167
gnl|LJGI|AV429250 weakly similar to UniRef100_A7Q161 Cluster: Ch... 301 8e-81
gnl|LJGI|GO029711 similar to UniRef100_A7Q161 Cluster: Chromosom... 256 4e-67
gnl|LJGI|FS357019 similar to UniRef100_A7Q161 Cluster: Chromosom... 149 7e-35
gnl|LJGI|TC62365 similar to UniRef100_A7Q161 Cluster: Chromosome... 107 2e-22
>gnl|LJGI|TC80712 similar to UniRef100_A7Q161 Cluster: Chromosome chr10 scaffold_43,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_43, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 793
Score = 1334 bits (673), Expect = 0.0
Identities = 676/677 (99%)
Strand = Plus / Plus
Query: 1 atgggtgagactggcaaaagatatcgaccgcggagagaccatgacgggggaagcaaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 atgggtgagactggcaaaagatatcgaccgcggagagaccatgacgggggaagcaaaaat 176
Query: 61 cagaagaggcgtgtgaataacaaagatgaaaggggtgatgatgaattgattgtgtatagg 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 cagaagaggcgcgtgaataacaaagatgaaaggggtgatgatgaattgattgtgtatagg 236
Query: 121 atactctgtccggatgaagcgattgggggtgttattggtaagaagggaaaagtgataaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 atactctgtccggatgaagcgattgggggtgttattggtaagaagggaaaagtgataaat 296
Query: 181 tcaataaggcaagagaccagggcaaaagtccaggttgtggatccatttcctggtgccacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tcaataaggcaagagaccagggcaaaagtccaggttgtggatccatttcctggtgccacg 356
Query: 241 tatcgagttataactatttattgctatgttaaagagaaggaagaaattgaggttgatgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tatcgagttataactatttattgctatgttaaagagaaggaagaaattgaggttgatgat 416
Query: 301 gagcttaacaacaagaggactctttgtgccgcccaagatgctcttctcaaggttcattct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gagcttaacaacaagaggactctttgtgccgcccaagatgctcttctcaaggttcattct 476
Query: 361 gcaatttcaaatgccaaggaaactgtaagggattctgaaaagaaacaaaaagaaaaggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gcaatttcaaatgccaaggaaactgtaagggattctgaaaagaaacaaaaagaaaaggaa 536
Query: 421 gaatgtcaaatccttgttccatcaagccagtctgcaaatatcattggcaaggctggggct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 gaatgtcaaatccttgttccatcaagccagtctgcaaatatcattggcaaggctggggct 596
Query: 481 accattaaaagactgagagttaagactaggaccaatatcaaggtcattccgaaggatgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 accattaaaagactgagagttaagactaggaccaatatcaaggtcattccgaaggatgca 656
Query: 541 gctgacccagcacactcatgcgctatggagtttgacaattttgtgttgattaccggtgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 gctgacccagcacactcatgcgctatggagtttgacaattttgtgttgattaccggtgaa 716
Query: 601 tcagaagcggtaaaaagagcattatttgcagtttcaactattatgtacaagttctccccc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 tcagaagcggtaaaaagagcattatttgcagtttcaactattatgtacaagttctccccc 776
Query: 661 aaggaggacattcctct 677
|||||||||||||||||
Sbjct: 777 aaggaggacattcctct 793
>gnl|LJGI|TC64242 similar to UniRef100_A7Q161 Cluster: Chromosome chr10 scaffold_43,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_43, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 827
Score = 1166 bits (588), Expect = 0.0
Identities = 588/588 (100%)
Strand = Plus / Plus
Query: 1 atgggtgagactggcaaaagatatcgaccgcggagagaccatgacgggggaagcaaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 atgggtgagactggcaaaagatatcgaccgcggagagaccatgacgggggaagcaaaaat 187
Query: 61 cagaagaggcgtgtgaataacaaagatgaaaggggtgatgatgaattgattgtgtatagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 cagaagaggcgtgtgaataacaaagatgaaaggggtgatgatgaattgattgtgtatagg 247
Query: 121 atactctgtccggatgaagcgattgggggtgttattggtaagaagggaaaagtgataaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 atactctgtccggatgaagcgattgggggtgttattggtaagaagggaaaagtgataaat 307
Query: 181 tcaataaggcaagagaccagggcaaaagtccaggttgtggatccatttcctggtgccacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tcaataaggcaagagaccagggcaaaagtccaggttgtggatccatttcctggtgccacg 367
Query: 241 tatcgagttataactatttattgctatgttaaagagaaggaagaaattgaggttgatgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tatcgagttataactatttattgctatgttaaagagaaggaagaaattgaggttgatgat 427
Query: 301 gagcttaacaacaagaggactctttgtgccgcccaagatgctcttctcaaggttcattct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gagcttaacaacaagaggactctttgtgccgcccaagatgctcttctcaaggttcattct 487
Query: 361 gcaatttcaaatgccaaggaaactgtaagggattctgaaaagaaacaaaaagaaaaggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gcaatttcaaatgccaaggaaactgtaagggattctgaaaagaaacaaaaagaaaaggaa 547
Query: 421 gaatgtcaaatccttgttccatcaagccagtctgcaaatatcattggcaaggctggggct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 gaatgtcaaatccttgttccatcaagccagtctgcaaatatcattggcaaggctggggct 607
Query: 481 accattaaaagactgagagttaagactaggaccaatatcaaggtcattccgaaggatgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 accattaaaagactgagagttaagactaggaccaatatcaaggtcattccgaaggatgca 667
Query: 541 gctgacccagcacactcatgcgctatggagtttgacaattttgtgttg 588
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gctgacccagcacactcatgcgctatggagtttgacaattttgtgttg 715
Score = 147 bits (74), Expect = 3e-34
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 588 gattaccggtgaatcagaagcggtaaaaagagcattatttgcagtttcaactattatgta 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 gattaccggtgaatcagaagcggtaaaaagagcattatttgcagtttcaactattatgta 813
Query: 648 caagttctccccca 661
||||||||||||||
Sbjct: 814 caagttctccccca 827
>gnl|LJGI|TC79593 similar to UniRef100_A7Q161 Cluster: Chromosome chr10 scaffold_43,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_43, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 609
Score = 587 bits (296), Expect = e-167
Identities = 296/296 (100%)
Strand = Plus / Plus
Query: 1535 cttattcgatgggacaaagtggctatggatcaatgcaatcatatgcctccaagttgtatg 1594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttattcgatgggacaaagtggctatggatcaatgcaatcatatgcctccaagttgtatg 60
Query: 1595 aaggtctgcctcccctgtcaacattggagatgttggttcctgctaatgcagttagtaaag 1654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaggtctgcctcccctgtcaacattggagatgttggttcctgctaatgcagttagtaaag 120
Query: 1655 tgttgggtaaaggagggacaaatatagccaatataaggaagatttcaggagcaacagtag 1714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgttgggtaaaggagggacaaatatagccaatataaggaagatttcaggagcaacagtag 180
Query: 1715 agatttctgactccaaatctggtcggggtgatcgtattgctcttatttctggcacacctg 1774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agatttctgactccaaatctggtcggggtgatcgtattgctcttatttctggcacacctg 240
Query: 1775 aacaaaagcgtgcagctgaaaacttgatccaggcattcataatggctacataagtt 1830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacaaaagcgtgcagctgaaaacttgatccaggcattcataatggctacataagtt 296
>gnl|LJGI|AV429250 weakly similar to UniRef100_A7Q161 Cluster: Chromosome chr10
scaffold_43, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr10 scaffold_43, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 152
Score = 301 bits (152), Expect = 8e-81
Identities = 152/152 (100%)
Strand = Plus / Plus
Query: 1318 gtcttaagactgagagaggatgtattgaaagaacgggacattggacactatccccctaga 1377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcttaagactgagagaggatgtattgaaagaacgggacattggacactatccccctaga 60
Query: 1378 ggtgctgaatcctattattcagaaagttctgttctttcggtgccatctttgctgccttca 1437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggtgctgaatcctattattcagaaagttctgttctttcggtgccatctttgctgccttca 120
Query: 1438 gttccttctgttactgctcctctagcttatga 1469
||||||||||||||||||||||||||||||||
Sbjct: 121 gttccttctgttactgctcctctagcttatga 152
>gnl|LJGI|GO029711 similar to UniRef100_A7Q161 Cluster: Chromosome chr10 scaffold_43,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_43, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 948
Score = 256 bits (129), Expect = 4e-67
Identities = 554/689 (80%), Gaps = 10/689 (1%)
Strand = Plus / Minus
Query: 1135 ccatccaaagtgataggctgtattatagggaaaggtggttcaatcataaatgaaattcgg 1194
||||||||||||||||| || ||||| || ||| ||||| ||||||| |||||||| |||
Sbjct: 912 ccatccaaagtgatagg-tgcattat-ggtaaaagtggt-caatcattaatgaaat-cgg 857
Query: 1195 aagagaactagggctgatgttcaaatctcaagaaatgataaacctaaatgtggagacgtg 1254
|||||||||||||| ||| ||| |||||| | | ||||| || ||||||| || ||
Sbjct: 856 aagagaactagggcagatattcgaatctctaaaggcgataagccaaaatgtgctgatgtt 797
Query: 1255 aatgatgaattgattgaggtagttggagaagttgattctgtgagagatgcactcatccag 1314
||||||||| | ||||||| | || | |||||| ||| ||||||||||| ||||||
Sbjct: 796 aatgatgaacttgttgaggtgggcggcgctattgattgtgtcagagatgcactaatccag 737
Query: 1315 attgtcttaagactgagagaggatgtattgaaagaacgggacattggacactatccccct 1374
|| |||| ||||| ||||| |||||||||| |||| |||||| |||||| |||| ||
Sbjct: 736 atcatcttgagacttagagatgatgtattgagagaaagggacactggacataatcctact 677
Query: 1375 agaggtgctgaatcctattattcagaaagttctgttctttcggtgccatctttgctgcct 1434
| ||||| |||||||| || |||| || ||| | ||| ||||| || ||||||||
Sbjct: 676 ataggtggtgaatccttgtactcaggtggtgctgcttattcattgccacctatgctgcct 617
Query: 1435 tcagttccttctgttactgctcctctagcttatgatcagaggcctgatagtagaactggt 1494
|| || |||||||| ||||||| | | |||||||||||| | || ||| ||||||
Sbjct: 616 tccgtatcttctgttgctgctccaatggtctatgatcagagggcggaaagtgcaactggc 557
Query: 1495 ctgggcatgctttcttccaacagcctttatggatatggatcttattcg---atgggacaa 1551
|||||||||||||||| | |||||| |||||||||||||| | ||| ||| | ||
Sbjct: 556 atgggcatgctttcttcaagcagcctgtatggatatggatcgttgtcgcagatgtgggaa 497
Query: 1552 agtggctatggatcaatgcaatcatatgcctccaagttgtatgaaggtctgcctcccctg 1611
|||||||||||||| || |||||| || ||||| |||||| | || ||||||| |
Sbjct: 496 agtggctatggatctatatcctcatatcccaccaagctgtatggaagtttgcctcctcca 437
Query: 1612 tcaacattggagatgttggttcctgctaatgcagttagtaaagtgttgggtaaaggaggg 1671
||||| |||| || ||| ||||||||||||| ||| ||||||| |||||||||||||||
Sbjct: 436 tcaactctggatatcttgattcctgctaatgctgttggtaaagtattgggtaaaggaggg 377
Query: 1672 acaaatatagccaatataaggaagatttcaggagcaacagtagagatttctgactccaaa 1731
| |||||||||||||||||||||||||||||||| ||| |||||||||||||| | | |
Sbjct: 376 gctaatatagccaatataaggaagatttcaggagctacaatagagatttctgacgctaga 317
Query: 1732 tctggtcggggtgatcgtattgctcttatttctggcacacctgaacaaaagcgtgcagct 1791
| || ||||||||||| || | || ||||||||||||||| | ||||||||||||
Sbjct: 316 ---gcccgtggtgatcgtatcgccttgatatctggcacacctgaagagaagcgtgcagct 260
Query: 1792 gaaaacttgatccaggcattcataatggc 1820
|||||||||||||||||||| || |||||
Sbjct: 259 gaaaacttgatccaggcatttatcatggc 231
>gnl|LJGI|FS357019 similar to UniRef100_A7Q161 Cluster: Chromosome chr10 scaffold_43,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_43, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 566
Score = 149 bits (75), Expect = 7e-35
Identities = 75/75 (100%)
Strand = Plus / Minus
Query: 1621 gagatgttggttcctgctaatgcagttagtaaagtgttgggtaaaggagggacaaatata 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gagatgttggttcctgctaatgcagttagtaaagtgttgggtaaaggagggacaaatata 507
Query: 1681 gccaatataaggaag 1695
|||||||||||||||
Sbjct: 506 gccaatataaggaag 492
>gnl|LJGI|TC62365 similar to UniRef100_A7Q161 Cluster: Chromosome chr10 scaffold_43,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_43, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 799
Score = 107 bits (54), Expect = 2e-22
Identities = 141/170 (82%)
Strand = Plus / Plus
Query: 415 aaggaagaatgtcaaatccttgttccatcaagccagtctgcaaatatcattggcaaggct 474
||||| || ||||||||||||||||| || ||||||||||| ||||||||||| ||||||
Sbjct: 623 aaggatgagtgtcaaatccttgttccgtcgagccagtctgcgaatatcattggtaaggct 682
Query: 475 ggggctaccattaaaagactgagagttaagactaggaccaatatcaaggtcattccgaag 534
|| ||||||||||| | ||||| |||||| || | ||||||||||| | | | | |
Sbjct: 683 ggtgctaccattaagaagttgagaagtaagacgagagctaatatcaaggttaatgccagg 742
Query: 535 gatgcagctgacccagcacactcatgcgctatggagtttgacaattttgt 584
|||||| | || ||| |||| ||||| |||||||||||||| ||||||||
Sbjct: 743 gatgcaacggatccaacacaatcatgtgctatggagtttgataattttgt 792
Score = 95.6 bits (48), Expect = 9e-19
Identities = 138/168 (82%)
Strand = Plus / Plus
Query: 117 taggatactctgtccggatgaagcgattgggggtgttattggtaagaagggaaaagtgat 176
||||||||||||||| |||||| ||||| |||| ||||| ||||| || ||||| ||
Sbjct: 310 taggatactctgtccagatgaactcattggtagtgtcattgggaagaatggcaaagtcat 369
Query: 177 aaattcaataaggcaagagaccagggcaaaagtccaggttgtggatccatttcctggtgc 236
|||||| ||| |||| ||||| |||| |||||| |||| ||||||| |||||| |||||
Sbjct: 370 aaattcgatacggcaggagactcgggcgaaagtcaaggtggtggatcgatttccgggtgc 429
Query: 237 cacgtatcgagttataactatttattgctatgttaaagagaaggaaga 284
|| | | || |||||||| || || |||||||||| |||||||||||
Sbjct: 430 caaggaccgggttataacgatctacagctatgttaaggagaaggaaga 477