Miyakogusa Predicted Gene

Lj6g3v1946320.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1946320.1 tr|I3WTA4|I3WTA4_NICAT Jasmonate ZIM domain
protein f OS=Nicotiana attenuata PE=2 SV=1,44.37,3e-19,TIFY,Tify;
seg,NULL; no description,Tify; tify,Tify; CCT_2,CO/COL/TOC1, conserved
site,CUFF.60244.1
         (414 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|CB828049 weakly similar to UniRef100_A7R0S3 Cluster: Ch...   228   2e-59

>gnl|LJGI|CB828049 weakly similar to UniRef100_A7R0S3 Cluster: Chromosome undetermined
           scaffold_319, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_319,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (30%)
          Length = 529

 Score =  228 bits (115), Expect = 2e-59
 Identities = 115/115 (100%)
 Strand = Plus / Plus

                                                                       
Query: 85  gaagaaagtagtaagagtccaatgcaaaattacttccagcagcaggaaaaccaacggccg 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gaagaaagtagtaagagtccaatgcaaaattacttccagcagcaggaaaaccaacggccg 60

                                                                  
Query: 145 ctgaccattttctatgaagggaagatttgtgttgcagatgtcacagagcatcagg 199
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctgaccattttctatgaagggaagatttgtgttgcagatgtcacagagcatcagg 115