Miyakogusa Predicted Gene
- Lj6g3v1946290.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1946290.1 Non Chatacterized Hit- tr|I1KRU1|I1KRU1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,86.45,0,SUBFAMILY NOT
NAMED,NULL; DEHYDROGENASE RELATED,NULL; seg,NULL; Thiamin
diphosphate-binding fold (TH,CUFF.60241.1
(1200 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78639 homologue to UniRef100_O24458 Cluster: Pyruvate... 620 e-177
gnl|LJGI|TC59934 homologue to UniRef100_A7PZ40 Cluster: Chromoso... 492 e-138
gnl|LJGI|TC59871 homologue to UniRef100_O24458 Cluster: Pyruvate... 373 e-102
gnl|LJGI|TC70149 homologue to UniRef100_A7PZ40 Cluster: Chromoso... 92 1e-17
gnl|LJGI|AU088796 similar to UniRef100_O24458 Cluster: Pyruvate ... 82 9e-15
>gnl|LJGI|TC78639 homologue to UniRef100_O24458 Cluster: Pyruvate dehydrogenase E1 beta
subunit; n=1; Arabidopsis thaliana|Rep: Pyruvate
dehydrogenase E1 beta subunit - Arabidopsis thaliana
(Mouse-ear cress), partial (25%)
Length = 635
Score = 620 bits (313), Expect = e-177
Identities = 313/313 (100%)
Strand = Plus / Plus
Query: 888 gacactggtgaacaaagggtatgatcctgaggtgattgacatcaggtctttgaaaccatt 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gacactggtgaacaaagggtatgatcctgaggtgattgacatcaggtctttgaaaccatt 60
Query: 948 tgaccttcacacaatagggaattcagtgaagaaaactcatcgtgtgctgattgtggaaga 1007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgaccttcacacaatagggaattcagtgaagaaaactcatcgtgtgctgattgtggaaga 120
Query: 1008 gtgcatgcgtactggtggaattggtgctagccttacagctgctatcactgaaaatttcaa 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgcatgcgtactggtggaattggtgctagccttacagctgctatcactgaaaatttcaa 180
Query: 1068 tgactatttggatgctcctgttgtgtgtttatcctctcaggatgtgccaaccccatacac 1127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgactatttggatgctcctgttgtgtgtttatcctctcaggatgtgccaaccccatacac 240
Query: 1128 agggccattggaggaatggacagtggtgcaacctgctcagattgtgacagcagttgagca 1187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agggccattggaggaatggacagtggtgcaacctgctcagattgtgacagcagttgagca 300
Query: 1188 gctatgccagtaa 1200
|||||||||||||
Sbjct: 301 gctatgccagtaa 313
>gnl|LJGI|TC59934 homologue to UniRef100_A7PZ40 Cluster: Chromosome chr4 scaffold_39,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_39, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 833
Score = 492 bits (248), Expect = e-138
Identities = 428/488 (87%)
Strand = Plus / Plus
Query: 711 ccgaagtgagaaccctgtgatactttttgagcatgtattgctttataacctcaaggagag 770
||||||||| ||||| ||||| |||||||| ||||| |||||||| ||||||||||||||
Sbjct: 3 ccgaagtgataaccccgtgatcctttttgaacatgttttgctttacaacctcaaggagag 62
Query: 771 aatcccagatgaagagtatgtattgtcacttgaagaagctgagatggttaggcctgggga 830
||| ||||||||||||||||| ||||||||||||||||| ||||||||||| || |||||
Sbjct: 63 aattccagatgaagagtatgtgttgtcacttgaagaagccgagatggttagacccgggga 122
Query: 831 acatatcacaattttaacctattccagaatgaggtatcatgtaatgcaagctgcaaagac 890
||| |||| || |||||||||||||| |||||||| ||||| |||||||||||||||||
Sbjct: 123 gcatgtcacgatattaacctattccaggatgaggtaccatgtcatgcaagctgcaaagac 182
Query: 891 actggtgaacaaagggtatgatcctgaggtgattgacatcaggtctttgaaaccatttga 950
| |||||||||| |||||||| ||||| || ||||| |||||||| |||||||| |||||
Sbjct: 183 attggtgaacaaggggtatgaccctgaagtaattgatatcaggtcattgaaaccgtttga 242
Query: 951 ccttcacacaatagggaattcagtgaagaaaactcatcgtgtgctgattgtggaagagtg 1010
||||||||||| ||||||||||| ||||| || ||| | ||||||||||| ||||||||
Sbjct: 243 tcttcacacaattgggaattcagtaaagaagacacatagggtgctgattgttgaagagtg 302
Query: 1011 catgcgtactggtggaattggtgctagccttacagctgctatcactgaaaatttcaatga 1070
|||| | |||||||||||||||||||| || || |||||||| | |||||||||||||||
Sbjct: 303 catgaggactggtggaattggtgctagtctgactgctgctattagtgaaaatttcaatga 362
Query: 1071 ctatttggatgctcctgttgtgtgtttatcctctcaggatgtgccaaccccatacacagg 1130
||||||||||||||| | || ||||| || |||||||| |||||||||||||| | ||
Sbjct: 363 ctatttggatgctcccatcgtttgtttgtcatctcaggacgtgccaaccccatatgctgg 422
Query: 1131 gccattggaggaatggacagtggtgcaacctgctcagattgtgacagcagttgagcagct 1190
|| ||||| ||| ||| ||||| || ||||||||||||||||||||||||||||||||
Sbjct: 423 accgttggaagaaatgacggtggttcagcctgctcagattgtgacagcagttgagcagct 482
Query: 1191 atgccagt 1198
|||||||
Sbjct: 483 ctgccagt 490
>gnl|LJGI|TC59871 homologue to UniRef100_O24458 Cluster: Pyruvate dehydrogenase E1
beta subunit; n=1; Arabidopsis thaliana|Rep: Pyruvate
dehydrogenase E1 beta subunit - Arabidopsis thaliana
(Mouse-ear cress), partial (32%)
Length = 766
Score = 373 bits (188), Expect = e-102
Identities = 293/328 (89%)
Strand = Plus / Plus
Query: 224 ctgggcatgaacttcttctttttgaagccttacgtgaaggtttggaagaagaaatggaaa 283
|||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 422 ctgggcatgaacttctcctttttgaagccctacgtgaaggtttggaagaagaaatggaga 481
Query: 284 gggatccccgagtatgcgtcatgggtgaagatgtaggtgattatggtgggtcttacaagg 343
||||||| |||||||| |||||||||||||||||| ||||||| || |||||||| |
Sbjct: 482 gggatcctaatgtatgcgttatgggtgaagatgtaggtcattatggaggatcttacaaag 541
Query: 344 tgactaaaggcctagcccctaagtttggagacctcagggttttggacacccctattgctg 403
||||||||| ||| ||| |||||||| ||||| || ||| ||||||||||||||||||
Sbjct: 542 tgactaaagacctggccaacaagtttggggacctgagagttctggacacccctattgctg 601
Query: 404 aaaatgccttcacaggcatgggcattggggctgccatgactggtctgaggccaattattg 463
| ||||||||||| |||||||||||||| ||||||||||||||||| |||||| ||||||
Sbjct: 602 agaatgccttcaccggcatgggcattggagctgccatgactggtctaaggccagttattg 661
Query: 464 agggcatgaacatgggatttctgcttcttgcatttaaccagatctctaacaactgtggca 523
||||||||||||||||||| || ||||| ||||| ||||| ||||||||||| ||||| |
Sbjct: 662 agggcatgaacatgggattcctacttctcgcattcaaccaaatctctaacaattgtggga 721
Query: 524 tgctccactacacatctggaggccagtt 551
|||| || ||||||||||||||||||||
Sbjct: 722 tgctgcattacacatctggaggccagtt 749
Score = 58.0 bits (29), Expect = 1e-07
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 70 tctcgtggatccctctcagaaagcaaaggtagcatatttgttgtcagatctgatgca 126
|||||| ||||||||||||| || |||| | | || |||||||||||||||||||||
Sbjct: 271 tctcgtagatccctctcagagaggaaagctggaatctttgttgtcagatctgatgca 327
>gnl|LJGI|TC70149 homologue to UniRef100_A7PZ40 Cluster: Chromosome chr4 scaffold_39,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_39, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 537
Score = 91.7 bits (46), Expect = 1e-17
Identities = 91/106 (85%)
Strand = Plus / Plus
Query: 1093 tgtttatcctctcaggatgtgccaaccccatacacagggccattggaggaatggacagtg 1152
||||| || |||||||| |||||||||||||| | || || ||||| ||| ||| |||
Sbjct: 12 tgtttgtcatctcaggacgtgccaaccccatatgctggaccgttggaagaaatgacggtg 71
Query: 1153 gtgcaacctgctcagattgtgacagcagttgagcagctatgccagt 1198
|| || |||||||||||||||||||||||||||||||| |||||||
Sbjct: 72 gttcagcctgctcagattgtgacagcagttgagcagctctgccagt 117
>gnl|LJGI|AU088796 similar to UniRef100_O24458 Cluster: Pyruvate dehydrogenase E1 beta
subunit; n=1; Arabidopsis thaliana|Rep: Pyruvate
dehydrogenase E1 beta subunit - Arabidopsis thaliana
(Mouse-ear cress), partial (8%)
Length = 414
Score = 81.8 bits (41), Expect = 9e-15
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 224 ctgggcatgaacttcttctttttgaagccttacgtgaaggtttggaagaagaaatggaaa 283
|||||||||||||||| |||||||||||| ||||| ||||||||||| || |||||||||
Sbjct: 227 ctgggcatgaacttctcctttttgaagccctacgtnaaggtttggaaaaaaaaatggaaa 286
Score = 58.0 bits (29), Expect = 1e-07
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 70 tctcgtggatccctctcagaaagcaaaggtagcatatttgttgtcagatctgatgca 126
|||||| ||||||||||||| || |||| | | || |||||||||||||||||||||
Sbjct: 76 tctcgtagatccctctcagagaggaaagctggaatctttgttgtcagatctgatgca 132