Miyakogusa Predicted Gene
- Lj6g3v1934050.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1934050.1 Non Chatacterized Hit- tr|I1M1E7|I1M1E7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.32638
PE,74.26,0,LUPUSLA,Lupus La protein; La,RNA-binding protein Lupus La;
RRM_1,RNA recognition motif domain; LA-RE,CUFF.60423.1
(1188 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57377 weakly similar to UniRef100_A8MS45 Cluster: Unc... 2355 0.0
gnl|LJGI|TC73940 similar to UniRef100_A7QB10 Cluster: Chromosome... 248 7e-65
gnl|LJGI|TC78225 similar to UniRef100_A7PU99 Cluster: Chromosome... 58 1e-07
>gnl|LJGI|TC57377 weakly similar to UniRef100_A8MS45 Cluster: Uncharacterized protein
At5g46250.3; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At5g46250.3 - Arabidopsis
thaliana (Mouse-ear cress), partial (54%)
Length = 1575
Score = 2355 bits (1188), Expect = 0.0
Identities = 1188/1188 (100%)
Strand = Plus / Plus
Query: 1 atggaaggcgccgaacagggtccaccttccgccaccgccgtggaccccactgcctccgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 atggaaggcgccgaacagggtccaccttccgccaccgccgtggaccccactgcctccgcc 136
Query: 61 ggtgaccccaccgcctcgtctcctccgctcggtgatcccgttactggtcccgatcctgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 ggtgaccccaccgcctcgtctcctccgctcggtgatcccgttactggtcccgatcctgct 196
Query: 121 actgccctggacgatgttgatgaaccggaaattcatgtcctgatttcagacgatgatcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 actgccctggacgatgttgatgaaccggaaattcatgtcctgatttcagacgatgatcac 256
Query: 181 gaatctcccgatcacgatcacgatcaagaggttgaccaccatgaggaagaccatgaccgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gaatctcccgatcacgatcacgatcaagaggttgaccaccatgaggaagaccatgaccgt 316
Query: 241 gatcacgcggctgagaccggtctttccttggatgatctcaagctcaagatcattagacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gatcacgcggctgagaccggtctttccttggatgatctcaagctcaagatcattagacag 376
Query: 301 gtggagtattatttcagtgatgaaaacctacccaatgataagtatctgttgggttttctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gtggagtattatttcagtgatgaaaacctacccaatgataagtatctgttgggttttctc 436
Query: 361 aagaagaatagggaagggtttgttcctacatcagtaattgcttcttttagaaaaatgaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aagaagaatagggaagggtttgttcctacatcagtaattgcttcttttagaaaaatgaag 496
Query: 421 aggctcactcgagaccattcaattattgttgctgcgctgaaggagtcttcactgcttgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aggctcactcgagaccattcaattattgttgctgcgctgaaggagtcttcactgcttgtt 556
Query: 481 gttagtggtgatggcagaagggttaagcggctcaatccacttcgtttcaacgaaactaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gttagtggtgatggcagaagggttaagcggctcaatccacttcgtttcaacgaaactaga 616
Query: 541 gatcataagttatatactgttttggtagagaatttgcccgagaaccgttcaaaggagaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gatcataagttatatactgttttggtagagaatttgcccgagaaccgttcaaaggagaac 676
Query: 601 attcagcaaatattccgtgaagctggaaatataaaaaggataaccattcatgacccgcat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 attcagcaaatattccgtgaagctggaaatataaaaaggataaccattcatgacccgcat 736
Query: 661 tctactgcagagtctgcaaaacatatcaagcgagaacagtttattagtagtaagttacat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tctactgcagagtctgcaaaacatatcaagcgagaacagtttattagtagtaagttacat 796
Query: 721 gctcttgtggaatatgagactattgaggctgctgagaaagctgtggttatgttcaatgat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 gctcttgtggaatatgagactattgaggctgctgagaaagctgtggttatgttcaatgat 856
Query: 781 gaacaagactggagaaatggcatgcatgttaaacttctcaagcaaatgggtaaatatgga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 gaacaagactggagaaatggcatgcatgttaaacttctcaagcaaatgggtaaatatgga 916
Query: 841 cacaaaaaacaagtttggaagggatctaattctgagaagaatagctcaggccatgtatct 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 cacaaaaaacaagtttggaagggatctaattctgagaagaatagctcaggccatgtatct 976
Query: 901 gaacaaactggagatgaggagaatcatggctcaaatgagcatcatgaagatactcctgag 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977 gaacaaactggagatgaggagaatcatggctcaaatgagcatcatgaagatactcctgag 1036
Query: 961 gaagaggatggggatcatttgtcaaaggataaaggtgggcagcggtatagaaatcaagga 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1037 gaagaggatggggatcatttgtcaaaggataaaggtgggcagcggtatagaaatcaagga 1096
Query: 1021 agatcaagaaaacataaatatcgtgccgtaaatggaatgggccatggatgtgcatcatct 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1097 agatcaagaaaacataaatatcgtgccgtaaatggaatgggccatggatgtgcatcatct 1156
Query: 1081 actcatgctgccgaagcatcgaagccgcccccaggacccaaaatgccagatggaacacgg 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1157 actcatgctgccgaagcatcgaagccgcccccaggacccaaaatgccagatggaacacgg 1216
Query: 1141 ggctttgcaatgggacgaggtcggcctcctgtccccgcttcaaattag 1188
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1217 ggctttgcaatgggacgaggtcggcctcctgtccccgcttcaaattag 1264
>gnl|LJGI|TC73940 similar to UniRef100_A7QB10 Cluster: Chromosome chr5 scaffold_72,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_72, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 587
Score = 248 bits (125), Expect = 7e-65
Identities = 128/129 (99%)
Strand = Plus / Plus
Query: 1060 ggccatggatgtgcatcatctactcatgctgccgaagcatcgaagccgcccccaggaccc 1119
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 39 ggccatggatgtgcatcatctactcatgctgccgaagcattgaagccgcccccaggaccc 98
Query: 1120 aaaatgccagatggaacacggggctttgcaatgggacgaggtcggcctcctgtccccgct 1179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 aaaatgccagatggaacacggggctttgcaatgggacgaggtcggcctcctgtccccgct 158
Query: 1180 tcaaattag 1188
|||||||||
Sbjct: 159 tcaaattag 167
>gnl|LJGI|TC78225 similar to UniRef100_A7PU99 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 579
Score = 58.0 bits (29), Expect = 1e-07
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 381 tgttcctacatcagtaattgcttcttttagaaaaatgaagaggctcactcgagaccattc 440
|||||||| |||| |||| ||||||||||||| ||| |||| |||||||| ||| |||||
Sbjct: 564 tgttcctatatcaataat-gcttcttttagaagaataaagaagctcactcaagatcattc 506
Query: 441 aattattgttgctgcgctgaa 461
| ||||| ||| ||| |||||
Sbjct: 505 atttattattgttgcactgaa 485