Miyakogusa Predicted Gene

Lj6g3v1933970.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1933970.1 Non Chatacterized Hit- tr|I1HGD7|I1HGD7_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,60.87,2e-19,60S
RIBOSOMAL PROTEIN L18A-RELATED,NULL; 60S RIBOSOMAL PROTEIN
L18A,Ribosomal protein L18a;
seg,NULL,NODE_41726_length_683_cov_7.893118.path2.1
         (459 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68814 weakly similar to UniRef100_Q8L9S1 Cluster: 60S...   868   0.0  

>gnl|LJGI|TC68814 weakly similar to UniRef100_Q8L9S1 Cluster: 60S ribosomal protein
           L18a-1; n=2; Arabidopsis thaliana|Rep: 60S ribosomal
           protein L18a-1 - Arabidopsis thaliana (Mouse-ear cress),
           partial (59%)
          Length = 709

 Score =  868 bits (438), Expect = 0.0
 Identities = 452/459 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggtgtcaattcttctcctatgagcgaggaggaaggtacgaacagaggaatagccacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23  atgggtgtcaattcttctcctatgagcgaggaggaaggtacgaacagaggaatagccacc 82

                                                                       
Query: 61  gatcaccattactatggaacctttcaaggcgttgctaattactacccttctcctcctcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83  gatcaccattactatggaacctttcaaggcgttgctaattactacccttctcctcctcct 142

                                                                       
Query: 121 ccaaatccaaactctcccgcttccaacggtggcgcctacgcttattaccaaggacaagga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 ccaaatccaaactctcccgcttccaacggtggcgcctacgcttattaccaaggacaagga 202

                                                                       
Query: 181 caagggtaccacgctcttccagtttatgctgttgcggaaggaaggcctgtaagagaacgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 caagggtaccacgctcttccagtttatgctgttgcggaaggaaggcctgtaagagaacgt 262

                                                                       
Query: 241 cgtctttgttgctgtggacttggtctcggttggttcttgtttataactggnnnnnnnctt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||       |||
Sbjct: 263 cgtctttgttgctgtggacttggtctcggttggttcttgtttataactggtttttttctt 322

                                                                       
Query: 301 ggtggcggtccctggtacattggagctttcttgctactatgtgtgcagatggattaccga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggtggcggtccctggtacattggagctttcttgctactatgtgtgcagatggattaccga 382

                                                                       
Query: 361 gaaaagcctggattaattgcatgcgcagttggttccctcgttgctgtgatagctgttact 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gaaaagcctggattaattgcatgcgcagttggttccctcgttgctgtgatagctgttact 442

                                                  
Query: 421 cttggtgttgcacatccacatctggcaaagttgacatga 459
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cttggtgttgcacatccacatctggcaaagttgacatga 481