Miyakogusa Predicted Gene
- Lj6g3v1931800.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1931800.1 Non Chatacterized Hit- tr|I1HE34|I1HE34_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,43.64,5e-17,zf-CCCH,Zinc finger, CCCH-type; ZF_C3H1,Zinc finger,
CCCH-type; no description,NULL; ZINC FINGER CCC,CUFF.60209.1
(1461 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68766 similar to UniRef100_A7NW62 Cluster: Chromosome... 2896 0.0
gnl|LJGI|TC76104 similar to UniRef100_A7NW62 Cluster: Chromosome... 365 e-100
gnl|LJGI|AV781302 similar to UniRef100_A7NW62 Cluster: Chromosom... 186 3e-46
gnl|LJGI|TC73416 similar to UniRef100_A7PTX9 Cluster: Chromosome... 88 2e-16
>gnl|LJGI|TC68766 similar to UniRef100_A7NW62 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (76%)
Length = 2580
Score = 2896 bits (1461), Expect = 0.0
Identities = 1461/1461 (100%)
Strand = Plus / Plus
Query: 1 atggagcagtacggccgctccaacgagggctcgcggtctgatccgtcgccggaatggacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 atggagcagtacggccgctccaacgagggctcgcggtctgatccgtcgccggaatggacc 341
Query: 61 ggacccggcggcgaaactggccttgaagaacctatgtggcaattggggctgggtggtgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ggacccggcggcgaaactggccttgaagaacctatgtggcaattggggctgggtggtgct 401
Query: 121 gcttccgacgaatcgtatccgcagcgtcccgatgaggctgattgctcctactatttgaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gcttccgacgaatcgtatccgcagcgtcccgatgaggctgattgctcctactatttgaga 461
Query: 181 accggtttctgcggctttggttcccggtgtcggttcaatcatccccgtgaccgtggcgcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 accggtttctgcggctttggttcccggtgtcggttcaatcatccccgtgaccgtggcgcg 521
Query: 241 gttattggagctgccagaactgccggggactatccagaacgagcaggccagcctgtgtgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gttattggagctgccagaactgccggggactatccagaacgagcaggccagcctgtgtgc 581
Query: 301 cagtattatatgaggacaggatcgtgcaaattcggtgcgtcttgcaagtatcatcaccct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 cagtattatatgaggacaggatcgtgcaaattcggtgcgtcttgcaagtatcatcaccct 641
Query: 361 aggcaggcaggaggcatggctagtccggtgtcactaaattattatggatatccaatacga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 aggcaggcaggaggcatggctagtccggtgtcactaaattattatggatatccaatacga 701
Query: 421 ccgggtgagaaagagtgctcctattatgtgaaaacgggacaatgtaagttcagtgcaact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 ccgggtgagaaagagtgctcctattatgtgaaaacgggacaatgtaagttcagtgcaact 761
Query: 481 tgtaaattccatcatccacttcccactggtgttcaaattcaagcaccaccgccagttccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 tgtaaattccatcatccacttcccactggtgttcaaattcaagcaccaccgccagttccc 821
Query: 541 ccggtttcacctttacctgtaccagtaccttcacccttgtatcaaaacgtacagtctcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 ccggtttcacctttacctgtaccagtaccttcacccttgtatcaaaacgtacagtctcca 881
Query: 601 tctggtccttcatctcaacaaatcggtgtactggttgcaaggccacctttattacctggt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 tctggtccttcatctcaacaaatcggtgtactggttgcaaggccacctttattacctggt 941
Query: 661 tcgtttgttcacagcccctacggacctgtggtagtctcccctactatggttcctttttct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942 tcgtttgttcacagcccctacggacctgtggtagtctcccctactatggttcctttttct 1001
Query: 721 ggttggggaccatatcaagcttctgcaacaagcccagtacttccttccagctctccatct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 ggttggggaccatatcaagcttctgcaacaagcccagtacttccttccagctctccatct 1061
Query: 781 aatgttggttcaacacagctttatgggataactcacctaccttcatctgctgctgcctat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1062 aatgttggttcaacacagctttatgggataactcacctaccttcatctgctgctgcctat 1121
Query: 841 actggaccatatcaaccttctggtttctcagttggtccttcaagcagtagtcagaagcag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1122 actggaccatatcaaccttctggtttctcagttggtccttcaagcagtagtcagaagcag 1181
Query: 901 tcattttcagaaaggccatatccaccagaaattcagtactattcgaaaataggggagtca 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1182 tcattttcagaaaggccatatccaccagaaattcagtactattcgaaaataggggagtca 1241
Query: 961 aaattgggtccatcatataggtatcaacatcaagcagacatgaatgctgcgccgaaagtg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1242 aaattgggtccatcatataggtatcaacatcaagcagacatgaatgctgcgccgaaagtg 1301
Query: 1021 aatgtcattcttagtcctgcaggccttcctttgcgcccgggggcaccaccttgcactcat 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1302 aatgtcattcttagtcctgcaggccttcctttgcgcccgggggcaccaccttgcactcat 1361
Query: 1081 tatgcacagcggggagtatgtaagtttggtcctgcatgcaagtttgatcatcctatgtct 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1362 tatgcacagcggggagtatgtaagtttggtcctgcatgcaagtttgatcatcctatgtct 1421
Query: 1141 tcaatgagttacagtccatctgcttcttccctgactgacatgccagttgcgccctatcct 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1422 tcaatgagttacagtccatctgcttcttccctgactgacatgccagttgcgccctatcct 1481
Query: 1201 gtgggttcatcaattggtactcttgctccaccatcttcatcatcagaattgcagcccgga 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1482 gtgggttcatcaattggtactcttgctccaccatcttcatcatcagaattgcagcccgga 1541
Query: 1261 cttaccacaggatccaacaaggagtctgttccatccagaatatcttcatcaatgaacaca 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1542 cttaccacaggatccaacaaggagtctgttccatccagaatatcttcatcaatgaacaca 1601
Query: 1321 tcgaccggatctgttggcttgactttgtctaccggtgaacctgtttctcaatcaagcact 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1602 tcgaccggatctgttggcttgactttgtctaccggtgaacctgtttctcaatcaagcact 1661
Query: 1381 caaccatctgctcagagttccattcctttagcagcagtcaattccaccacaagtagcaat 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1662 caaccatctgctcagagttccattcctttagcagcagtcaattccaccacaagtagcaat 1721
Query: 1441 gtttctcacacttcaagctaa 1461
|||||||||||||||||||||
Sbjct: 1722 gtttctcacacttcaagctaa 1742
>gnl|LJGI|TC76104 similar to UniRef100_A7NW62 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (74%)
Length = 2368
Score = 365 bits (184), Expect = e-100
Identities = 424/504 (84%)
Strand = Plus / Plus
Query: 145 cgtcccgatgaggctgattgctcctactatttgagaaccggtttctgcggctttggttcc 204
|||||||||||||||||||| ||||||| ||||||| |||| || || | || ||
Sbjct: 265 cgtcccgatgaggctgattgtatctactatctgagaactggttattgtggttacggctcg 324
Query: 205 cggtgtcggttcaatcatccccgtgaccgtggcgcggttattggagctgccagaactgcc 264
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 325 cggtgtcggttcaatcatccccgtgaccgtggcgcggttattggagctgcgaggactggg 384
Query: 265 ggggactatccagaacgagcaggccagcctgtgtgccagtattatatgaggacaggatcg 324
||||| ||||| ||| ||||||| ||||||||||| ||||| ||||||||||| |||||
Sbjct: 385 ggggagtatccggaaagagcaggacagcctgtgtgtcagtactatatgaggacgggatca 444
Query: 325 tgcaaattcggtgcgtcttgcaagtatcatcaccctaggcaggcaggaggcatggctagt 384
|||||||| ||| | ||||||||||| || || ||||||||| || ||||| ||| |
Sbjct: 445 tgcaaatttggttcatcttgcaagtaccaccatcctaggcagccatcaggcactactact 504
Query: 385 ccggtgtcactaaattattatggatatccaatacgaccgggtgagaaagagtgctcctat 444
|| ||||||||||||||| ||||||||||| | ||| |||| |||||||||| ||||||
Sbjct: 505 cctgtgtcactaaattatcatggatatccattgcgaatgggtcagaaagagtgttcctat 564
Query: 445 tatgtgaaaacgggacaatgtaagttcagtgcaacttgtaaattccatcatccacttccc 504
||||||||||| |||||||| ||||| ||||||||||||||||||||||||||| ||
Sbjct: 565 tatgtgaaaactggacaatgcaagtttggtgcaacttgtaaattccatcatccacagcct 624
Query: 505 actggtgttcaaattcaagcaccaccgccagttcccccggtttcacctttacctgtacca 564
| |||| ||||| | ||||||| ||||||||||| | |||||||| | ||||||||
Sbjct: 625 gccggtggccaaatgctagcaccatcgccagttccctctgtttcaccgctgcctgtaccg 684
Query: 565 gtaccttcacccttgtatcaaaacgtacagtctccatctggtccttcatctcaacaaatc 624
|| |||||||| | ||||||| | |||| ||||||||||||||||||| ||||||
Sbjct: 685 gtgccttcaccagtttatcaaactggacagcctccatctggtccttcatcacaacaatat 744
Query: 625 ggtgtactggttgcaaggccacct 648
|| |||||||| ||||||||||||
Sbjct: 745 ggcgtactggtcgcaaggccacct 768
Score = 317 bits (160), Expect = 1e-85
Identities = 328/384 (85%)
Strand = Plus / Plus
Query: 1030 cttagtcctgcaggccttcctttgcgcccgggggcaccaccttgcactcattatgcacag 1089
|||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1168 cttagtcctgtgggtcttcctttgcgcccgggggcaccaccttgcactcattatacacag 1227
Query: 1090 cggggagtatgtaagtttggtcctgcatgcaagtttgatcatcctatgtcttcaatgagt 1149
|| ||| | |||||||||||| |||| ||||| ||||||||||| || || |||||
Sbjct: 1228 cgtggaatttgtaagtttggttctgcgtgcaaatttgatcatccgattggatcgctgagt 1287
Query: 1150 tacagtccatctgcttcttccctgactgacatgccagttgcgccctatcctgtgggttca 1209
||||| |||||||||||||||||| |||| ||||| ||||| |||||||||||||||||
Sbjct: 1288 tacagcccatctgcttcttccctggctgatatgccggttgcaccctatcctgtgggttcc 1347
Query: 1210 tcaattggtactcttgctccaccatcttcatcatcagaattgcagcccggacttaccaca 1269
||||||||||||||||| ||| ||||||| |||||||| |||| ||| | |||| || |
Sbjct: 1348 tcaattggtactcttgccccatcatcttcttcatcagagttgcggcctgaacttgcccct 1407
Query: 1270 ggatccaacaaggagtctgttccatccagaatatcttcatcaatgaacacatcgaccgga 1329
||||||| ||||||| | ||| | |||||||| ||||||||||||| |||||| || |||
Sbjct: 1408 ggatccagcaaggagccagtttcgtccagaatgtcttcatcaatgagcacatctactgga 1467
Query: 1330 tctgttggcttgactttgtctaccggtgaacctgtttctcaatcaagcactcaaccatct 1389
|| ||||||||||| ||||| || | || ||| |||||||||||||||||| | ||||
Sbjct: 1468 tcagttggcttgaccttgtcaactgctggacccatttctcaatcaagcactctgcaatct 1527
Query: 1390 gctcagagttccattcctttagca 1413
|||| |||||||| | ||||||||
Sbjct: 1528 gctccgagttccagttctttagca 1551
>gnl|LJGI|AV781302 similar to UniRef100_A7NW62 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 533
Score = 186 bits (94), Expect = 3e-46
Identities = 178/206 (86%)
Strand = Plus / Plus
Query: 145 cgtcccgatgaggctgattgctcctactatttgagaaccggtttctgcggctttggttcc 204
|||||||||||||||||||| ||||||| ||||||| |||| || || | || ||
Sbjct: 327 cgtcccgatgaggctgattgtatctactatctgagaactggttattgtggttacggctcg 386
Query: 205 cggtgtcggttcaatcatccccgtgaccgtggcgcggttattggagctgccagaactgcc 264
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 387 cggtgtcggttcaatcatccccgtgaccgtggcgcggttattggagctgcgaggactggg 446
Query: 265 ggggactatccagaacgagcaggccagcctgtgtgccagtattatatgaggacaggatcg 324
||||| ||||| ||| ||||||| ||||||||||| ||||| ||||||||||| |||||
Sbjct: 447 ggggagtatccggaaagagcaggacagcctgtgtgtcagtactatatgaggacgggatca 506
Query: 325 tgcaaattcggtgcgtcttgcaagta 350
|||||||| ||| | |||||||||||
Sbjct: 507 tgcaaatttggttcatcttgcaagta 532
>gnl|LJGI|TC73416 similar to UniRef100_A7PTX9 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 820
Score = 87.7 bits (44), Expect = 2e-16
Identities = 83/96 (86%)
Strand = Plus / Plus
Query: 402 ttatggatatccaatacgaccgggtgagaaagagtgctcctattatgtgaaaacgggaca 461
||||||||| ||| | ||||||||||||||||| |||||||| ||| |||||||||| ||
Sbjct: 567 ttatggatacccattgcgaccgggtgagaaagaatgctcctactatttgaaaacggggca 626
Query: 462 atgtaagttcagtgcaacttgtaaattccatcatcc 497
||| || || || |||||||||||||||||||||
Sbjct: 627 atgcaaatttggtttaacttgtaaattccatcatcc 662