Miyakogusa Predicted Gene
- Lj6g3v1931430.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1931430.1 Non Chatacterized Hit- tr|G7IPZ5|G7IPZ5_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,62.64,0,seg,NULL; Mitochondrial termination factor
repeats,Mitochodrial transcription termination factor-rel,CUFF.60212.1
(1107 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS336816 similar to UniRef100_A1FCC5 Cluster: Protein-t... 440 e-123
gnl|LJGI|TC74460 385 e-106
gnl|LJGI|TC79714 weakly similar to UniRef100_A7PTX3 Cluster: Chr... 56 5e-07
>gnl|LJGI|FS336816 similar to UniRef100_A1FCC5 Cluster: Protein-tyrosine kinase; n=1;
Pseudomonas putida W619|Rep: Protein-tyrosine kinase -
Pseudomonas putida W619, partial (6%)
Length = 842
Score = 440 bits (222), Expect = e-123
Identities = 280/301 (93%), Gaps = 10/301 (3%)
Strand = Plus / Minus
Query: 41 acctcaacatcaccatcatcaaaaccccctcatttcttcaccacttttcctcttccaaac 100
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 459 acctcaacatcaccatcatcaaaaccccctcatttcttcaccacttttcctcctccaaac 400
Query: 101 aacactctttcaccaccaactacctcatcaacaacttcaacttctcccctgaaaccgctt 160
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 399 aacactcattcaccaccaactacctcatcaacaatttcaacttctcccctgaaaccgctt 340
Query: 161 ccaccatctccacccgagttcgtctcaccgactcacaaaaccctgactcaatcctcgcct 220
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ccagcatctccacccgagttcgtctcaccgactcacaaaaccctgactcaatcctcgcct 280
Query: 221 tgttcaaatcccacggtttcacaaactctcagttatctcgcatcatccaaagctacccta 280
|||||| | ||||||| |||||||||||| ||||||| || |||||||||
Sbjct: 279 tgttcagagcccacggcttcacaaactcttagttatcacgaatcatccaa---------- 230
Query: 281 agcttctttcctccgaccccaacaaaaccgttcttcccaaattcaatttcttcctctcaa 340
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 agcttctttcctctgaccccaacaaaaccgttcttcccaaattcaatttcttcctctcaa 170
Query: 341 a 341
|
Sbjct: 169 a 169
>gnl|LJGI|TC74460
Length = 610
Score = 385 bits (194), Expect = e-106
Identities = 224/234 (95%)
Strand = Plus / Minus
Query: 41 acctcaacatcaccatcatcaaaaccccctcatttcttcaccacttttcctcttccaaac 100
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 403 acctcaacatcaccatcatcaaaaccccctcatttcttcaccacttttcctcctccaaac 344
Query: 101 aacactctttcaccaccaactacctcatcaacaacttcaacttctcccctgaaaccgctt 160
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 aacactcattcaccaccaactacctcatcaacaacttcaacttctcccctgaaaccgctt 284
Query: 161 ccaccatctccacccgagttcgtctcaccgactcacaaaaccctgactcaatcctcgcct 220
||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 283 ccagcatctccacccgagttcgtctcaccgactcacaaaacccttactcaatcctcgcct 224
Query: 221 tgttcaaatcccacggtttcacaaactctcagttatctcgcatcatccaaagct 274
|||||| | |||| || |||||||||||||||||||| || |||||||||||||
Sbjct: 223 tgttcagagcccatggcttcacaaactctcagttatcacgaatcatccaaagct 170
>gnl|LJGI|TC79714 weakly similar to UniRef100_A7PTX3 Cluster: Chromosome chr7
scaffold_31, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome chr7 scaffold_31, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 1406
Score = 56.0 bits (28), Expect = 5e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1027 aaatttgtgaattgctttgaggaggaggaagc 1058
|||||||||||||| |||||||||||||||||
Sbjct: 1128 aaatttgtgaattgttttgaggaggaggaagc 1159