Miyakogusa Predicted Gene
- Lj6g3v1931420.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1931420.1 Non Chatacterized Hit- tr|I1MF50|I1MF50_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,90.71,0,TPR_11,NULL;
TPR_2,Tetratricopeptide TPR2; TPR_7,Tetratricopeptide repeat;
TPR_8,Tetratricopeptide r,CUFF.60206.1
(1680 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61102 similar to UniRef100_A7NW69 Cluster: Chromosome... 1376 0.0
gnl|LJGI|TC79385 similar to UniRef100_Q0DKP8 Cluster: Os05g01499... 726 0.0
gnl|LJGI|TC74596 homologue to UniRef100_A7NW69 Cluster: Chromoso... 170 2e-41
gnl|LJGI|BP056960 82 1e-14
gnl|LJGI|BP053618 similar to UniRef100_A2P4M7 Cluster: GGDEF fam... 76 8e-13
>gnl|LJGI|TC61102 similar to UniRef100_A7NW69 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 824
Score = 1376 bits (694), Expect = 0.0
Identities = 694/694 (100%)
Strand = Plus / Plus
Query: 1 atggaagttccgaaggatcaaatcgccactcttctcgaccatggcctctacaactctgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 atggaagttccgaaggatcaaatcgccactcttctcgaccatggcctctacaactctgct 140
Query: 61 cagatgctcggttgttttcttgtttcttcacctgctgccaatgctgaatcggcccctcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 cagatgctcggttgttttcttgtttcttcacctgctgccaatgctgaatcggcccctcac 200
Query: 121 ctcaaaactgagagcttggtgctacttggtgattcattcttccaagaaagggagtatcgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcaaaactgagagcttggtgctacttggtgattcattcttccaagaaagggagtatcgt 260
Query: 181 agagccattcatacctataagcaagctttgcaacactacaagatgattccgaaacagaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagccattcatacctataagcaagctttgcaacactacaagatgattccgaaacagaac 320
Query: 241 atggcgtcttctcggactgcgttgtcatcgaacaggtcttcttctccaaattcgtgcaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atggcgtcttctcggactgcgttgtcatcgaacaggtcttcttctccaaattcgtgcaat 380
Query: 301 gtatcggtaatcaatgagaatgaggtcaagttcaaaattgcatcatgtcactgttctctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtatcggtaatcaatgagaatgaggtcaagttcaaaattgcatcatgtcactgttctctg 440
Query: 361 aatgagaacaaagcggctttggctgagatggatggaattccagtcaaagctagaaatttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatgagaacaaagcggctttggctgagatggatggaattccagtcaaagctagaaatttg 500
Query: 421 gcaatgaacttgttattaggaaagctatatcgaatttgtagacaaagtcgagctgctgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcaatgaacttgttattaggaaagctatatcgaatttgtagacaaagtcgagctgctgct 560
Query: 481 gctatttacaaagaatgtctaagacattgtccttatgtacttgaggctatcactgcttta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gctatttacaaagaatgtctaagacattgtccttatgtacttgaggctatcactgcttta 620
Query: 541 tctgaactgggagttactgcaaaagacatcatttcgttgtttcctcagactccaaataga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctgaactgggagttactgcaaaagacatcatttcgttgtttcctcagactccaaataga 680
Query: 601 agtgggagggcttcatctgatcatattgactcaagtcgttggcttcaacgctacgttgaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agtgggagggcttcatctgatcatattgactcaagtcgttggcttcaacgctacgttgaa 740
Query: 661 gctcagtgttgcttggcttcaaatgattacaaag 694
||||||||||||||||||||||||||||||||||
Sbjct: 741 gctcagtgttgcttggcttcaaatgattacaaag 774
>gnl|LJGI|TC79385 similar to UniRef100_Q0DKP8 Cluster: Os05g0149900 protein; n=1; Oryza
sativa Japonica Group|Rep: Os05g0149900 protein - Oryza
sativa subsp. japonica (Rice), partial (29%)
Length = 536
Score = 726 bits (366), Expect = 0.0
Identities = 386/395 (97%)
Strand = Plus / Plus
Query: 1286 attctggtggcagagaaaaggcnnnnnnnttctacgagtctgcattaaggctggaatctg 1345
|||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 1 attctggtggcagagaaaaggcaaaaaaattctacgagtctgcattaaggctggaacctg 60
Query: 1346 gttaccttggagctgctctagctttggctgagctccatgttattgaggggcgaaatggag 1405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttaccttggagctgctctagctttggctgagctccatgttattgaggggcgaaatggag 120
Query: 1406 atgctgtgtctctgcttgagcgatatcttaaagactgggctgatgattctcttcatgtta 1465
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 121 atgctgtgtctctgcttgagcgatatcttaaagaccgggctgatgattctcttcatgtta 180
Query: 1466 aacttgcacaagtttttgctgccactaatatgctgcaggaggctttgtcacattatcaag 1525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aacttgcacaagtttttgctgccactaatatgctgcaggaggctttgtcacattatcaag 240
Query: 1526 ctgcattaagattaaatccccataacgaagcagcaaaacggggtttagagcgtttagaga 1585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctgcattaagattaaatccccataacgaagcagcaaaacggggtttagagcgtttagaga 300
Query: 1586 agcagatgaagggagttgatcctgatgcacctgaagaagatgaagatgatgttgaagatg 1645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agcagatgaagggagttgatcctgatgcacctgaagaagatgaagatgatgttgaagatg 360
Query: 1646 ctgacggagatcaagacgagactgaacttctctga 1680
|||||||||||||||||||||||||||||||||||
Sbjct: 361 ctgacggagatcaagacgagactgaacttctctga 395
>gnl|LJGI|TC74596 homologue to UniRef100_A7NW69 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (4%)
Length = 665
Score = 170 bits (86), Expect = 2e-41
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 1595 agggagttgatcctgatgcacctgaagaagatgaagatgatgttgaagatgctgacggag 1654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 agggagttgatcctgatgcacctgaagaagatgaagatgatgttgaagatgctgacggag 222
Query: 1655 atcaagacgagactgaacttctctga 1680
||||||||||||||||||||||||||
Sbjct: 223 atcaagacgagactgaacttctctga 248
>gnl|LJGI|BP056960
Length = 511
Score = 81.8 bits (41), Expect = 1e-14
Identities = 72/81 (88%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 943 agaccagaggtttttgtagctttatctgttttatgggaaaggaaagatgagaaaagggca 1002
|||| ||||||||||||||||| |||| || |||||||| ||||||||||||| |||||
Sbjct: 419 agacgagaggtttttgtagctt-atctacttaatgggaaatgaaagatgagaaaggggca 361
Query: 1003 ttatcatatgctgagcagagc 1023
|||||||||| |||| |||||
Sbjct: 360 ttatcatatgttgagtagagc 340
>gnl|LJGI|BP053618 similar to UniRef100_A2P4M7 Cluster: GGDEF family protein; n=1;
Vibrio cholerae 1587|Rep: GGDEF family protein - Vibrio,
partial (2%)
Length = 498
Score = 75.8 bits (38), Expect = 8e-13
Identities = 71/81 (87%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 943 agaccagaggtttttgtagctttatctgttttatgggaaaggaaagatgagaaaagggca 1002
|||| ||||||||||||||||| |||| || |||||||| ||||||||||||| || ||
Sbjct: 478 agacgagaggtttttgtagctt-atctacttaatgggaaatgaaagatgagaaagggnca 420
Query: 1003 ttatcatatgctgagcagagc 1023
|||||||||| |||| |||||
Sbjct: 419 ttatcatatgttgagtagagc 399