Miyakogusa Predicted Gene
- Lj6g3v1918320.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1918320.1 tr|G7ISH8|G7ISH8_MEDTR RING finger and CHY zinc
finger domain-containing protein OS=Medicago
truncat,89.51,0,zf-CHY,Zinc finger, CHY-type; zf-RING_2,Zinc finger,
RING-type; no description,Zinc finger, RING/FYV,CUFF.60203.1
(804 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77593 similar to UniRef100_A7NW76 Cluster: Chromosome... 686 0.0
gnl|LJGI|TC74832 similar to UniRef100_A7NW76 Cluster: Chromosome... 680 0.0
gnl|LJGI|TC70677 similar to UniRef100_A7NW76 Cluster: Chromosome... 583 e-166
gnl|LJGI|DC597593 similar to UniRef100_A7NW76 Cluster: Chromosom... 347 7e-95
>gnl|LJGI|TC77593 similar to UniRef100_A7NW76 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 431
Score = 686 bits (346), Expect = 0.0
Identities = 346/346 (100%)
Strand = Plus / Plus
Query: 1 atggaatcctctcccattgaacgccttgactttgggaagatgggatatgggtgcaagcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 atggaatcctctcccattgaacgccttgactttgggaagatgggatatgggtgcaagcat 145
Query: 61 tacaggagaagatgcaggattcgagcaccctgttgcaatgaagtttactcatgccgtcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 tacaggagaagatgcaggattcgagcaccctgttgcaatgaagtttactcatgccgtcat 205
Query: 121 tgtcataacgacgcaacgagcatgctgagcaacccttttgatcgccacgagcttgaacgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 tgtcataacgacgcaacgagcatgctgagcaacccttttgatcgccacgagcttgaacgc 265
Query: 181 caggaggttgaacaagttgtttgttcagtttgtgacacagaacagccagctgctcaagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 caggaggttgaacaagttgtttgttcagtttgtgacacagaacagccagctgctcaagtt 325
Query: 241 tgcacaaactgtggtgtcagaatgggagagtatttctgtgacatctgcaaattttttgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tgcacaaactgtggtgtcagaatgggagagtatttctgtgacatctgcaaattttttgat 385
Query: 301 gatgatatagggaaacagcagtttcattgtgatgattgtgggatct 346
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gatgatatagggaaacagcagtttcattgtgatgattgtgggatct 431
>gnl|LJGI|TC74832 similar to UniRef100_A7NW76 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 1147
Score = 680 bits (343), Expect = 0.0
Identities = 655/759 (86%)
Strand = Plus / Plus
Query: 18 tgaacgccttgactttgggaagatgggatatgggtgcaagcattacaggagaagatgcag 77
|||||| ||||| ||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 91 tgaacgtcttgattttgggaagatggaacatgggtgcaagcattacaggagaagatgcag 150
Query: 78 gattcgagcaccctgttgcaatgaagtttactcatgccgtcattgtcataacgacgcaac 137
|||||| || ||||| ||||| || | ||||| ||||| |||||||| ||||| |||||
Sbjct: 151 gattcgtgctccctgctgcaacgagatctactcctgccgccattgtcacaacgaggcaac 210
Query: 138 gagcatgctgagcaacccttttgatcgccacgagcttgaacgccaggaggttgaacaagt 197
||||||| ||| || | | |||| | ||||| || | ||||| || ||| |||||||
Sbjct: 211 gagcatgttgaagaatcactctgataggcacgaactggttcgccaagatgttaaacaagt 270
Query: 198 tgtttgttcagtttgtgacacagaacagccagctgctcaagtttgcacaaactgtggtgt 257
||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 271 tgtttgttctgtttgtgacactgaacagccagctgctcaagtttgcacaaattgtggtgt 330
Query: 258 cagaatgggagagtatttctgtgacatctgcaaattttttgatgatgatatagggaaaca 317
|| ||||||||| |||||||| ||||||||| ||| || ||||||||| || ||||||
Sbjct: 331 caaaatgggagaatatttctgcgacatctgcgtattcttcgatgatgatgcagagaaaca 390
Query: 318 gcagtttcattgtgatgattgtgggatctgcagagttggtggacgtgagaactatttcca 377
|||||||||||||||||||||||||||||||| |||||||| || || || | ||||||
Sbjct: 391 acagtttcattgtgatgattgtgggatctgcagggttggtgggcgagaaaattttttcca 450
Query: 378 ctgcaagaagtgcgggtcttgctattcagttaatctgcgcggtaatcattcatgtgtgga 437
||||||||| |||||||||||||| |||||| ||| || | ||||||| |||||||||
Sbjct: 451 ctgcaagaaatgcgggtcttgctactcagttggtctacgtgataatcatatatgtgtgga 510
Query: 438 gaactccatgaggcatcattgtcccatttgttatgagtatctttttgactcattgaaaga 497
|||||||||||||||||| ||||| |||||||||||||| |||||||| ||| |||||||
Sbjct: 511 gaactccatgaggcatcactgtcctatttgttatgagtacctttttgattcactgaaaga 570
Query: 498 cactattgtcatgaaatgtggtcacacaatgcattgtgattgttaccaagagatgataaa 557
|||| ||| ||||||||||||||||| ||||| | ||| || ||||| || ||||||||
Sbjct: 571 cactgctgttatgaaatgtggtcacacgatgcactctgaatgctaccatgaaatgataaa 630
Query: 558 gcgtgacaagtgctgttgccccatatgctccaagtcggtaattgacatgtctaggagatg 617
|||||||| | |||||| ||||||||||||||||| || ||||||||||| || ||
Sbjct: 631 acgtgacaattactgttgtcccatatgctccaagtcaatagctgacatgtctatgatgtg 690
Query: 618 gaagagaattgatgaagagattgaagcaactgtcatgcctgatgattatcggtatagaaa 677
|||||| | ||||||||||||||| ||||||||||||||||| | ||||||||| |||||
Sbjct: 691 gaagaggactgatgaagagattgaggcaactgtcatgcctgaagtttatcggtacagaaa 750
Query: 678 ggtttggatactctgcaatgactgcaatgacacaaccgaagtttacttccacatcattgg 737
||| |||||||| || ||||||||||| |||||||||||||||||||||| || ||||
Sbjct: 751 ggtctggatactatgtaatgactgcaacaacacaaccgaagtttacttccatattcttgg 810
Query: 738 gcataaatgcggtcactgcagttcgtataatactcgtgc 776
||| ||||||||||||||||| || ||||| ||||||||
Sbjct: 811 gcaaaaatgcggtcactgcagatcatataacactcgtgc 849
>gnl|LJGI|TC70677 similar to UniRef100_A7NW76 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 635
Score = 583 bits (294), Expect = e-166
Identities = 294/294 (100%)
Strand = Plus / Plus
Query: 511 aaatgtggtcacacaatgcattgtgattgttaccaagagatgataaagcgtgacaagtgc 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaatgtggtcacacaatgcattgtgattgttaccaagagatgataaagcgtgacaagtgc 60
Query: 571 tgttgccccatatgctccaagtcggtaattgacatgtctaggagatggaagagaattgat 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgttgccccatatgctccaagtcggtaattgacatgtctaggagatggaagagaattgat 120
Query: 631 gaagagattgaagcaactgtcatgcctgatgattatcggtatagaaaggtttggatactc 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaagagattgaagcaactgtcatgcctgatgattatcggtatagaaaggtttggatactc 180
Query: 691 tgcaatgactgcaatgacacaaccgaagtttacttccacatcattgggcataaatgcggt 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgcaatgactgcaatgacacaaccgaagtttacttccacatcattgggcataaatgcggt 240
Query: 751 cactgcagttcgtataatactcgtgctattgctcctcctgttcttcctcaatga 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cactgcagttcgtataatactcgtgctattgctcctcctgttcttcctcaatga 294
>gnl|LJGI|DC597593 similar to UniRef100_A7NW76 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 582
Score = 347 bits (175), Expect = 7e-95
Identities = 337/391 (86%)
Strand = Plus / Plus
Query: 18 tgaacgccttgactttgggaagatgggatatgggtgcaagcattacaggagaagatgcag 77
|||||| ||||| || |||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 165 tgaacgtcttgatttcgggaagatggaacatgggtgcaagcattacaggagaagatgcag 224
Query: 78 gattcgagcaccctgttgcaatgaagtttactcatgccgtcattgtcataacgacgcaac 137
|||||| || ||||| ||||| || | ||||| ||||| |||||||| ||||| |||||
Sbjct: 225 gattcgtgctccctgctgcaacgagatctactcctgccgccattgtcacaacgaggcaac 284
Query: 138 gagcatgctgagcaacccttttgatcgccacgagcttgaacgccaggaggttgaacaagt 197
||||||| ||| || | | |||| | ||||| || | ||||| || ||| |||||||
Sbjct: 285 gagcatgttgaagaatcactctgataggcacgaactggttcgccaagatgttaaacaagt 344
Query: 198 tgtttgttcagtttgtgacacagaacagccagctgctcaagtttgcacaaactgtggtgt 257
||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 345 tgtttgttctgtttgtgacactgaacagccagctgctcaagtttgcacaaattgtggtgt 404
Query: 258 cagaatgggagagtatttctgtgacatctgcaaattttttgatgatgatatagggaaaca 317
|| ||||||||| |||||||| ||||||||| ||| || ||||||||| || ||||||
Sbjct: 405 caaaatgggagaatatttctgcgacatctgcgtattcttcgatgatgatgcagagaaaca 464
Query: 318 gcagtttcattgtgatgattgtgggatctgcagagttggtggacgtgagaactatttcca 377
|||||||||||||||||||||||||||||||| |||||||| || || || | ||||||
Sbjct: 465 acagtttcattgtgatgattgtgggatctgcagggttggtgggcgagaaaattttttcca 524
Query: 378 ctgcaagaagtgcgggtcttgctattcagtt 408
||||||||| |||||||||||||| ||||||
Sbjct: 525 ctgcaagaaatgcgggtcttgctactcagtt 555