Miyakogusa Predicted Gene
- Lj6g3v1918240.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1918240.1 tr|G7ISK0|G7ISK0_MEDTR Tubby-like F-box protein
OS=Medicago truncatula GN=MTR_2g020280 PE=4 SV=1,87.79,0,TUBBY
PROTEIN-RELATED,NULL; TUBBY-RELATED,NULL; no description,NULL; no
description,Tubby, C-termina,CUFF.60191.1
(1179 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62542 similar to UniRef100_Q8VY21 Cluster: Tubby-like... 2337 0.0
gnl|LJGI|TC75692 similar to UniRef100_Q8VY21 Cluster: Tubby-like... 1352 0.0
gnl|LJGI|BW627702 homologue to UniRef100_UPI0000F32A27 Cluster: ... 295 3e-79
gnl|LJGI|TC61900 similar to UniRef100_Q8VY21 Cluster: Tubby-like... 96 6e-19
gnl|LJGI|TC79613 similar to UniRef100_Q9M3H9 Cluster: Tubby-like... 80 4e-14
gnl|LJGI|TC62681 homologue to UniRef100_Q2HSA0 Cluster: Tubby; C... 80 4e-14
gnl|LJGI|TC57408 56 5e-07
gnl|LJGI|BP048535 homologue to UniRef100_A7NTB0 Cluster: Chromos... 52 8e-06
gnl|LJGI|TC67069 52 8e-06
>gnl|LJGI|TC62542 similar to UniRef100_Q8VY21 Cluster: Tubby-like F-box protein 3; n=1;
Arabidopsis thaliana|Rep: Tubby-like F-box protein 3 -
Arabidopsis thaliana (Mouse-ear cress), partial (85%)
Length = 2052
Score = 2337 bits (1179), Expect = 0.0
Identities = 1179/1179 (100%)
Strand = Plus / Plus
Query: 1 atggcgattatacggagcttaattcaggatatgagatcgaggtcgcagagggtggtggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 atggcgattatacggagcttaattcaggatatgagatcgaggtcgcagagggtggtggtg 481
Query: 61 gaggaggacgcggcggcggcggtggtggtcggcgatgggttgaggcagagctgctgggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gaggaggacgcggcggcggcggtggtggtcggcgatgggttgaggcagagctgctgggct 541
Query: 121 aacatgccgcaggagcttctccgtgaggtgcttctccgaatcgaggcgtcggaggagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 aacatgccgcaggagcttctccgtgaggtgcttctccgaatcgaggcgtcggaggagaag 601
Query: 181 tggccggcgaggaagagtgtggtggcgtgtgccggagtttgccggagctggagggagatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tggccggcgaggaagagtgtggtggcgtgtgccggagtttgccggagctggagggagatc 661
Query: 241 accaaggacatcgttaagaaacctgaattttcatccaagttaaccttccccatctctgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 accaaggacatcgttaagaaacctgaattttcatccaagttaaccttccccatctctgtt 721
Query: 301 aagcagcctggtccaagggagaatctcctccagtgctttataagccgcaaccggaccacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 aagcagcctggtccaagggagaatctcctccagtgctttataagccgcaaccggaccacc 781
Query: 361 caaacatattatttgtatctcaatttaactagtgcactatgtgatgatggaaagttcctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 caaacatattatttgtatctcaatttaactagtgcactatgtgatgatggaaagttcctt 841
Query: 421 ctcgctgcacgcaaatgcagacgtcccacctgcacagattatatcatctctttacatgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 ctcgctgcacgcaaatgcagacgtcccacctgcacagattatatcatctctttacatgca 901
Query: 481 gatgatatgtcaaggggaagcaacgcctatgttgggaaactcagatcaaattttctggga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 gatgatatgtcaaggggaagcaacgcctatgttgggaaactcagatcaaattttctggga 961
Query: 541 accaagttcacaatctatgatggccagccacctcatgctggggcaaagattacaaaaagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 accaagttcacaatctatgatggccagccacctcatgctggggcaaagattacaaaaagt 1021
Query: 601 cgctcgactagactggtgaatctaaaacaagtttcacccaaggtcccaacaggaaactat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 cgctcgactagactggtgaatctaaaacaagtttcacccaaggtcccaacaggaaactat 1081
Query: 661 ccaatagctcacatctcatacgaattgaatgtgctaggttccagggggcctaggcgaatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 ccaatagctcacatctcatacgaattgaatgtgctaggttccagggggcctaggcgaatg 1141
Query: 721 cattgtgtcatggattccattccgacctctgcaattgaaccaggaggggtagcccctaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 cattgtgtcatggattccattccgacctctgcaattgaaccaggaggggtagcccctaca 1201
Query: 781 cagaccgagttttctcttaacaacgtagatatgttcccctcattcccatttttccggtcg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1202 cagaccgagttttctcttaacaacgtagatatgttcccctcattcccatttttccggtcg 1261
Query: 841 aagtcaagtcgtgctgaaaactctttatctggacctttggctgataaaaaagacgggaca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1262 aagtcaagtcgtgctgaaaactctttatctggacctttggctgataaaaaagacgggaca 1321
Query: 901 ctcgtgttgaaaaacaagtctcccaggtggcatgagcagctgcagtgttggtgcttaaac 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1322 ctcgtgttgaaaaacaagtctcccaggtggcatgagcagctgcagtgttggtgcttaaac 1381
Query: 961 tttcatggacgggtgacagttgcctcggtgaaaaactttcagctggtagcttctgcggaa 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1382 tttcatggacgggtgacagttgcctcggtgaaaaactttcagctggtagcttctgcggaa 1441
Query: 1021 aatggacctgctggaccagaacatgataagattatcctacaatttgggaaaattgggaag 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1442 aatggacctgctggaccagaacatgataagattatcctacaatttgggaaaattgggaag 1501
Query: 1081 gatttgtttacaatggattaccggtaccctatctcagcatttcaggcttttgcaatctgc 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1502 gatttgtttacaatggattaccggtaccctatctcagcatttcaggcttttgcaatctgc 1561
Query: 1141 ctcagcagctttgataccaagattgcttgtgaatgacgt 1179
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1562 ctcagcagctttgataccaagattgcttgtgaatgacgt 1600
>gnl|LJGI|TC75692 similar to UniRef100_Q8VY21 Cluster: Tubby-like F-box protein 3;
n=1; Arabidopsis thaliana|Rep: Tubby-like F-box protein
3 - Arabidopsis thaliana (Mouse-ear cress), partial
(47%)
Length = 962
Score = 1352 bits (682), Expect = 0.0
Identities = 697/702 (99%)
Strand = Plus / Plus
Query: 1 atggcgattatacggagcttaattcaggatatgagatcgaggtcgcagagggtggtggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atggcgattatacggagcttaattcaggatatgagatcgaggtcgcagagggtggtggtg 320
Query: 61 gaggaggacgcggcggcggcggtggtggtcggcgatgggttgaggcagagctgctgggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaggaggacgcggcggcggcggtggtggtcggcgatgggttgaggcagagctgctgggct 380
Query: 121 aacatgccgcaggagcttctccgtgaggtgcttctccgaatcgaggcgtcggaggagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacatgccgcaggagcttctccgtgaggtgcttctccgaatcgaggcgtcggaggagaag 440
Query: 181 tggccggcgaggaagagtgtggtggcgtgtgccggagtttgccggagctggagggagatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggccggcgaggaagagtgtggtggcgtgtgccggagtttgccggagctggagggagatc 500
Query: 241 accaaggacatcgttaagaaacctgaattttcatccaagttaaccttccccatctctgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 accaaggacatcgttaagaaacctgaattttcatccaagttaaccttccccatctctgtt 560
Query: 301 aagcagcctggtccaagggagaatctcctccagtgctttataagccgcaaccggaccacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagcagcctggtccaagggagaatctcctccagtgctttataagccgcaaccggaccacc 620
Query: 361 caaacatattatttgtatctcaatttaactagtgcactatgtgatgatggaaagttcctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caaacatattatttgtatctcaatttaactagtgcactatgtgatgatggaaagttcctt 680
Query: 421 ctcgctgcacgcaaatgcagacgtcccacctgcacagattatatcatctctttacatgca 480
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 681 ctcgctgcacgcaaatgcagacgtcccacctgcacagattatataatctctttacatgca 740
Query: 481 gatgatatgtcaaggggaagcaacgcctatgttgggaaactcagatcaaattttctggga 540
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 741 gatgatatgtcaaggggaagcaacacctatgttgggaaactcagatcaaattttctggga 800
Query: 541 accaagttcacaatctatgatggccagccacctcatgctggggcaaagattacaaaaagt 600
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 801 accaagttcacaatctatgatggccagccacctcatgcaggggcaaagattacaaaaagt 860
Query: 601 cgctcgactagactggtgaatctaaaacaagtttcacccaaggtcccaacaggaaactat 660
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 cgctccactaggctggtgaatctaaaacaagtttcacccaaggtcccaacaggaaactat 920
Query: 661 ccaatagctcacatctcatacgaattgaatgtgctaggttcc 702
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 ccaatagctcacatctcatacgaattgaatgtgctaggttcc 962
>gnl|LJGI|BW627702 homologue to UniRef100_UPI0000F32A27 Cluster: Ankyrin repeat
domain-containing protein 43.; n=1; Bos taurus|Rep:
Ankyrin repeat domain-containing protein 43. - Bos
Taurus, partial (5%)
Length = 481
Score = 295 bits (149), Expect = 3e-79
Identities = 149/149 (100%)
Strand = Plus / Plus
Query: 1 atggcgattatacggagcttaattcaggatatgagatcgaggtcgcagagggtggtggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 atggcgattatacggagcttaattcaggatatgagatcgaggtcgcagagggtggtggtg 392
Query: 61 gaggaggacgcggcggcggcggtggtggtcggcgatgggttgaggcagagctgctgggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gaggaggacgcggcggcggcggtggtggtcggcgatgggttgaggcagagctgctgggct 452
Query: 121 aacatgccgcaggagcttctccgtgaggt 149
|||||||||||||||||||||||||||||
Sbjct: 453 aacatgccgcaggagcttctccgtgaggt 481
>gnl|LJGI|TC61900 similar to UniRef100_Q8VY21 Cluster: Tubby-like F-box protein 3; n=1;
Arabidopsis thaliana|Rep: Tubby-like F-box protein 3 -
Arabidopsis thaliana (Mouse-ear cress), partial (87%)
Length = 1640
Score = 95.6 bits (48), Expect = 6e-19
Identities = 102/120 (85%)
Strand = Plus / Plus
Query: 1057 ctacaatttgggaaaattgggaaggatttgtttacaatggattaccggtaccctatctca 1116
|||||||| || ||| |||| |||||| |||| || |||||||||| || || ||||||
Sbjct: 1218 ctacaattcggaaaagttggaaaggatgtgttcaccatggattaccaatatccaatctca 1277
Query: 1117 gcatttcaggcttttgcaatctgcctcagcagctttgataccaagattgcttgtgaatga 1176
|| ||| | || |||||||| ||||||||||||||||| |||||||| ||||||||||||
Sbjct: 1278 gcctttgaagcatttgcaatatgcctcagcagctttgacaccaagatcgcttgtgaatga 1337
Score = 56.0 bits (28), Expect = 5e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 198 tgtggtggcgtgtgccggagtttgccggagctggag 233
||||||||| |||||||| |||||||||||||||||
Sbjct: 359 tgtggtggcctgtgccggcgtttgccggagctggag 394
>gnl|LJGI|TC79613 similar to UniRef100_Q9M3H9 Cluster: Tubby-like protein; n=1; Cicer
arietinum|Rep: Tubby-like protein - Cicer arietinum
(Chickpea) (Garbanzo), partial (57%)
Length = 1071
Score = 79.8 bits (40), Expect = 4e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 908 tgaaaaacaagtctcccaggtggcatgagcagctgcagtgttggtgcttaaacttt 963
||||||||||| ||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 507 tgaaaaacaaggctcccagatggcatgagcagctgcagtgctggtgcttgaacttt 562
Score = 58.0 bits (29), Expect = 1e-07
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 499 agcaacgcctatgttgggaaactcagatcaaattttctgggaaccaagttcac 551
|||||| | ||| ||||||||||||| ||||| ||| ||||||||||||||||
Sbjct: 83 agcaacacatatattgggaaactcaggtcaaactttttgggaaccaagttcac 135
>gnl|LJGI|TC62681 homologue to UniRef100_Q2HSA0 Cluster: Tubby; Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Tubby; Cyclin-like F-box -
Medicago truncatula (Barrel medic), partial (87%)
Length = 1306
Score = 79.8 bits (40), Expect = 4e-14
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 920 ctcccaggtggcatgagcagctgcagtgttggtgcttaaactttcatggacgggtgacag 979
|||| |||||||||||||| ||||||| |||||||| || || ||||| || |||||||
Sbjct: 864 ctccgaggtggcatgagcatttgcagtgctggtgcttgaatttccatggtcgtgtgacag 923
Query: 980 ttgcctcggtgaaaaactttcagctggt 1007
|||| || ||||| ||||||||||||||
Sbjct: 924 ttgcatcagtgaagaactttcagctggt 951
>gnl|LJGI|TC57408
Length = 1745
Score = 56.0 bits (28), Expect = 5e-07
Identities = 112/140 (80%)
Strand = Plus / Plus
Query: 1035 accagaacatgataagattatcctacaatttgggaaaattgggaaggatttgtttacaat 1094
|||||| || || |||||||| || || ||||| ||| | ||||| || |||| || ||
Sbjct: 1377 accagagcacgacaagattattctgcagtttggcaaagtggggaaagacatgttcaccat 1436
Query: 1095 ggattaccggtaccctatctcagcatttcaggcttttgcaatctgcctcagcagctttga 1154
|||||| ||||| ||| | || ||||| || ||||||||||| ||| | |||||||||||
Sbjct: 1437 ggattatcggtatcctttgtctgcattccaagcttttgcaatatgcttaagcagctttga 1496
Query: 1155 taccaagattgcttgtgaat 1174
||||| | ||||||||||
Sbjct: 1497 caccaaactagcttgtgaat 1516
>gnl|LJGI|BP048535 homologue to UniRef100_A7NTB0 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 500
Score = 52.0 bits (26), Expect = 8e-06
Identities = 80/98 (81%)
Strand = Plus / Minus
Query: 1057 ctacaatttgggaaaattgggaaggatttgtttacaatggattaccggtaccctatctca 1116
||||| |||||||||||||||||||| | || || ||||||||||| || || ||||
Sbjct: 330 ctacagtttgggaaaattgggaaggacatattcaccatggattaccgatatcccctctcc 271
Query: 1117 gcatttcaggcttttgcaatctgcctcagcagctttga 1154
|| || || || |||||||||||| | ||||| |||||
Sbjct: 270 gctttccaagcctttgcaatctgcttgagcagttttga 233
>gnl|LJGI|TC67069
Length = 989
Score = 52.0 bits (26), Expect = 8e-06
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 1048 aagattatcctacaatttgggaaaattgggaaggatttgtttacaatggattaccggtac 1107
|||||||| || || || ||||| |||| ||||| ||||||||||||| || ||||||
Sbjct: 332 aagattattcttcagttcgggaaggttggcaaggacatgtttacaatggactatcggtac 391
Query: 1108 cctatctcagcatttcaggcttttgc 1133
|| | || |||||||||||||||||
Sbjct: 392 ccgctgtctgcatttcaggcttttgc 417