Miyakogusa Predicted Gene
- Lj6g3v1918200.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1918200.1 tr|G7LE23|G7LE23_MEDTR 30S ribosomal protein S5
OS=Medicago truncatula GN=MTR_8g093680 PE=3 SV=1,78.93,0,seg,NULL; 30S
RIBOSOMAL PROTEIN S5,NULL; RIBOSOMAL S SUBUNIT,Ribosomal protein S5;
Ribosomal protein,CUFF.60181.1
(1506 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76378 similar to UniRef100_A7PJH9 Cluster: Chromosome... 1629 0.0
gnl|LJGI|TC72419 similar to UniRef100_A7PJH9 Cluster: Chromosome... 789 0.0
>gnl|LJGI|TC76378 similar to UniRef100_A7PJH9 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (59%)
Length = 1151
Score = 1629 bits (822), Expect = 0.0
Identities = 909/938 (96%)
Strand = Plus / Plus
Query: 565 agggttattggggagctcattaatcgtctcaaagtagtaactgaccaaaaggataagttc 624
|||||||||||||| ||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 2 agggttattggggatctcataaatcgcctcaaagtagtaactgaccagaaggataagttc 61
Query: 625 attctgcagaacaagcttaatagggccttgagattggtgcagtggaaggaggctttcgat 684
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 62 attctgcagaacaagcttaatagggccttgagattggtgcagtggaaggaggcttttgat 121
Query: 685 cctgataaccctgacaattatggtgtcattcaacatgaacagttgggacctactgcagat 744
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 122 cctgataaccctgacaattatggtgtcattcaacatgaacagctgggacctacttcagat 181
Query: 745 gccctgcaacatgctggctttgaaaaggagaagcaaactatacaaggagaaggagatgct 804
||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||| |||
Sbjct: 182 gccctgcaaaatgctggctttgaaaaggagaagcaaaccatacaaggacaaggagacgct 241
Query: 805 gctgacgacgatgatgaacaagagtttgatgacatgaaagaaaaagacaacattatactg 864
||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 242 gctgatgacgatgatgaacaagagtttgatgacatgaaagaaaaagacaacataatactg 301
Query: 865 gctaaacttgatgcgattgacaagaaacttgaggagaaactagcagaacttgagtataca 924
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gctaaacttgacgccattgacaagaaacttgaggagaaactagcagaacttgagtataca 361
Query: 925 tttggaaagaagggaaaggttctcgaagaagagatcagagatcttgcagaggagagaaat 984
|||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 362 tttggaaagaagggcaaggttctagaagaagagatcagagatcttacagaggagagaaat 421
Query: 985 gagttaaccgagaagaaaagaaggcctctttaccggaagggttttgatgtaaagttgata 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 422 gagttaaccgagaagaaaagaaggcctctttaccggaagggttttgatgtaaaattgata 481
Query: 1045 aatgtgaaccgaacttgtaaagtcacaaagggtggacaagtcgttaagtacactgctatg 1104
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 aacgtgaaccgaacttgtaaagtcacaaagggtggacaagtcgttaagtacactgctatg 541
Query: 1105 ctggcttgtggcaactataatggtgttgtcggttttgcaaaagccaaaggtcctgcagtt 1164
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 542 ctggcttgtggcaactataatggtgttgtgggttttgcaaaagccaaaggccctgcagtt 601
Query: 1165 ccagttgccctccagaaggcatatgagaagtgctttcagaatttgcattttgttgagcgt 1224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ccagttgccctccagaaggcatatgagaagtgctttcagaatttgcattttgttgagcgt 661
Query: 1225 catgaggagcatacaattgcacatgcaatacaaacctcttataaaaagaccaaggtgtat 1284
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 662 catgaggagcatacaattgcacacgcaatacaaacctcttttaaaaagaccaaggtgtat 721
Query: 1285 ctctggcctgcccccactgcaactggcatgaaagctggcagaatagtccaaaccatactg 1344
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 722 ctctggcctgcccccactgcaactggcatgaaagctggcagaatagtcccaaccatactg 781
Query: 1345 catttagctggttttaagaatgtcaagtcgaaggttgttggttccagaaaccctcataac 1404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 catttagctggttttaagaatgtcaagtcgaaggttgttggttccagaaaccctcataac 841
Query: 1405 acggttaaggctgtcttcaaagcgcttaatgcgattgaaacgccaagggatgtccaagag 1464
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 842 actgttaaggctgtcttcaaagcgcttaatgcgattgaaacgcccagggatgtcccagag 901
Query: 1465 aagtttggccggactgtggttgagaagtatcttttgta 1502
|||||||||||||||||||||||||||||||| |||||
Sbjct: 902 aagtttggccggactgtggttgagaagtatctattgta 939
>gnl|LJGI|TC72419 similar to UniRef100_A7PJH9 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 771
Score = 789 bits (398), Expect = 0.0
Identities = 553/600 (92%), Gaps = 16/600 (2%)
Strand = Plus / Plus
Query: 3 gggttatcttcgatacggtggacagacttttaggcagatattaagatgtaa---aagtgc 59
||||||||||| ||| ||| |||| ||||||||||| ||||||||||||| ||||||
Sbjct: 185 gggttatcttcaatatggtagacaaacttttaggcaaatattaagatgtagtacaagtgc 244
Query: 60 cggcaatgtggtccgaaactccgtgaggtcgcaactggggtgtgaaggcgctgcgttatc 119
|||||||||||| ||||||||||||| |||||||| |||||||||||| ||||||||||
Sbjct: 245 tggcaatgtggtcagaaactccgtgagatcgcaactcgggtgtgaaggcactgcgttatc 304
Query: 120 gtggtactactccccttttgcgaggaagactctttattcgacgtcttccgatgccaggat 179
| || |||||| |||||| |||||||||||||||||| |||||||||||
Sbjct: 305 atcgtcgtactccg---------ggaagagtctttattcgacgtcttctgatgccaggat 355
Query: 180 agtgcaggaccttctagctcaggtggagaaggataggcttagagagaaaaatgagagaat 239
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 356 agtgcaggaccttcttgctcaggtggagaaggataggctgagagagaaaaatgagagaat 415
Query: 240 gagggctggcttggacactgctgacattgatgctgagtgtgaagaggactacatgggtgt 299
|||||| ||||||||||| |||||||||||||| ||| ||||||||||||||||||| ||
Sbjct: 416 gagggcgggcttggacacggctgacattgatgccgagggtgaagaggactacatgggcgt 475
Query: 300 tggccctctcattgagaagcttgaaaaggagaagctcaaggagtgtcctgaattgatgcg 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 gggccctctcattgagaagcttgaaaaggagaagctcaaggagtgtcctgaattgatgcg 535
Query: 360 ctatgaagagccaactgactctgatagcgatgaagatgagtatgagaccagccagaagaa 419
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 536 ctatgaagagccaacggactctgacagcgatgaagatgagtatgagaccagccagaagaa 595
Query: 420 gtttgatgattttgagaggaagttcaagaggcaccaagatttgcttaagaacttcactga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 gtttgatgattttgagaggaagttcaagaggcaccaagatttgcttaagaacttcactga 655
Query: 480 cgctgacacactcgatgatgctttcaagtggatgaacagaattgacaagtttgagaacaa 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 cgctgacacactcgatgatgctttcaagtggatgaacagaattgacaagtttgagaacag 715
Query: 540 gcattttaggctccgtcctgaatacagggttattggggagctcattaatcgtctcaaagt 599
|||||| | ||||||||||| ||||| ||||||||||||||||| | |||||||||||||
Sbjct: 716 gcatttca-gctccgtcctg-ataca-ggttattggggagctca-tgatcgtctcaaagt 771