Miyakogusa Predicted Gene
- Lj6g3v1916080.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1916080.2 Non Chatacterized Hit- tr|I1MF85|I1MF85_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.36187 PE,84.02,0,The
RING-variant domain is a C4HC3 zinc-fing,Zinc finger, RING-CH-type;
RING/U-box,NULL; ZF_RING_CH,,CUFF.60179.2
(1239 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BF177830 similar to UniRef100_A7NWA0 Cluster: Chromosom... 890 0.0
gnl|LJGI|BW630807 833 0.0
gnl|LJGI|TC82629 similar to UniRef100_A7NWA0 Cluster: Chromosome... 674 0.0
>gnl|LJGI|BF177830 similar to UniRef100_A7NWA0 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 461
Score = 890 bits (449), Expect = 0.0
Identities = 456/457 (99%), Gaps = 1/457 (0%)
Strand = Plus / Plus
Query: 426 gacatataatgaacagattaagccacataaagatgttgttcgtgctaaggtttcaaggtc 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gacatataatgaacagattaagccacataaagatgttgttcgtgctaaggtttcaaggtc 63
Query: 486 cctttctgtacctggacgaaatgtagttattgtaagatctgtctccttctctacccgtaa 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 cctttctgtacctggacgaaatgtagttattgtaagatctgtctccttctctacccgtaa 123
Query: 546 tgaacaggaacaacaagatataaatgatgatcaaataactcctgcgccagtagaaagtgc 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 tgaacaggaacaacaagatataaatgatgatcaaataactcctgcgccagtagaaagtgc 183
Query: 606 tgccgatgaagaaattcctgaagaggaagcagtgtgcaggatatgttttgacgtttgcga 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tgccgatgaagaaattcctgaagaggaagcagtgtgcaggatatgttttgacgtttgcga 243
Query: 666 tgaaagaaataccttcaaaatggaatgcagttgcaaaggtgacctgacgttggtgcatga 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tgaaagaaataccttcaaaatggaatgcagttgcaaaggtgacctgacgttggtgcatga 303
Query: 726 agaatgtttaattaaatggtttagcttaaaaggaaacaagaaatgtgatgtatgtgggca 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 agaatgtttaattaaatggtttagcttaaaaggaaacaagaaatgtgatgtatgtgggca 363
Query: 786 agaagttcagaatttacctgtaaccttgcttcgtgtgtccagctctgttcgacagaacag 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 agaagttcagaatttacctgtaaccttgcttcgtgtgtccagctctgttcgacagaacag 423
Query: 846 acagtcacagaatcagcagaacctacgttcagagtca 882
||||||||||||||||||||| |||||||||||||||
Sbjct: 424 acagtcacagaatcagcagaa-ctacgttcagagtca 459
>gnl|LJGI|BW630807
Length = 463
Score = 833 bits (420), Expect = 0.0
Identities = 423/424 (99%)
Strand = Plus / Plus
Query: 1 atgcaagcaactcaaccatcacccactcatgaagctcctcagatttcccatcaggctgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 atgcaagcaactcaaccatcacccactcatgaagctcctcagatttcccatcaggctgac 99
Query: 61 aaccagctaaacaaagaagattcagataacagacctagcgggaagcgtccagatatttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 aaccagctaaacaaagaagattcagataacagacctagcgggaagcgtccagatatttca 159
Query: 121 cttcaagttccacctagacctgcaggatttggcaccactagtggtggaaaggttctgaac 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 160 cttcaagttccacctagacctgcaggatttggcgccactagtggtggaaaggttctgaac 219
Query: 181 cattctcaaagtttctccaaagggaactcatcaccaagaggctttttgcgggccttaagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 cattctcaaagtttctccaaagggaactcatcaccaagaggctttttgcgggccttaagc 279
Query: 241 ttcaaaagaaaaggaaatgtaacagatggcgaaagaagcagcctccttaatccagaaccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ttcaaaagaaaaggaaatgtaacagatggcgaaagaagcagcctccttaatccagaaccc 339
Query: 301 aagacatctgcagacaatcctaatatggcctccatatctgaagttccatggtcaaggtgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 aagacatctgcagacaatcctaatatggcctccatatctgaagttccatggtcaaggtgt 399
Query: 361 acttctcttcccgttacacctgcaacaaatttgtcccctgcagtttctacgcctatttcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 acttctcttcccgttacacctgcaacaaatttgtcccctgcagtttctacgcctatttcc 459
Query: 421 gcaa 424
||||
Sbjct: 460 gcaa 463
>gnl|LJGI|TC82629 similar to UniRef100_A7NWA0 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (45%)
Length = 652
Score = 674 bits (340), Expect = 0.0
Identities = 340/340 (100%)
Strand = Plus / Plus
Query: 900 ctttgtggtgcttgtcctgataagcacaatatgctattttttcttccttgaacagctact 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctttgtggtgcttgtcctgataagcacaatatgctattttttcttccttgaacagctact 60
Query: 960 gcttcctgatttgaagactcaagccatcattatagcaggaccatttgcctttaccttggg 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcttcctgatttgaagactcaagccatcattatagcaggaccatttgcctttaccttggg 120
Query: 1020 cctcctggcatctatttttgcaatcatccttgcgattaaagagtatatatggacatacgc 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cctcctggcatctatttttgcaatcatccttgcgattaaagagtatatatggacatacgc 180
Query: 1080 tgcacttgagttcgcacttgtggctataactgtgcatatattttatagtatgtttcactt 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgcacttgagttcgcacttgtggctataactgtgcatatattttatagtatgtttcactt 240
Query: 1140 gacggccatttatgcaatactactttcatcagttttgggttttggaatttctatgggcat 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gacggccatttatgcaatactactttcatcagttttgggttttggaatttctatgggcat 300
Query: 1200 caactatttgtatatccagtatgtcacttggagacttcag 1239
||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caactatttgtatatccagtatgtcacttggagacttcag 340