Miyakogusa Predicted Gene

Lj6g3v1915990.3
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1915990.3 Non Chatacterized Hit- tr|F8L8H1|F8L8H1_SIMNZ
Putative uncharacterized protein OS=Simkania
negevensi,26.89,2e-18,Nucleoside hydrolase,Inosine/uridine-preferring
nucleoside hydrolase domain; no description,Inosine/,CUFF.60164.3
         (1314 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP054489 similar to UniRef100_A7NWB1 Cluster: Chromosom...   246   3e-64

>gnl|LJGI|BP054489 similar to UniRef100_A7NWB1 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (10%)
          Length = 487

 Score =  246 bits (124), Expect = 3e-64
 Identities = 223/256 (87%)
 Strand = Plus / Plus

                                                                       
Query: 88  cggattcttttggatacagatgttgatactgatgatttctttgctcttctctaccttttg 147
           ||||||||  |||| |||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 232 cggattctgatggacacagatgttgatacagatgatttctttgctctgctctaccttttg 291

                                                                       
Query: 148 aagcttaacagatcagaatttcagttggagggaatcactgtgagtgcaaatggttggact 207
           ||||| ||||||||  | ||||| ||||||||||||||  | | ||||||| |||||   
Sbjct: 292 aagctcaacagatctcagtttcaattggagggaatcacgatcaatgcaaatagttggtta 351

                                                                       
Query: 208 aatgcaggacatgctgtgaatcaagtttatgacttgctttacatgatggggagagatgac 267
            |||| |||||||||||||||||| |||||||| | ||||| ||||||||| ||||||| 
Sbjct: 352 gatgctggacatgctgtgaatcaaatttatgacatactttatatgatggggcgagatgat 411

                                                                       
Query: 268 atatcagttggagtgggaggtgagggtggaatacttccaaatggtaccatactccctaat 327
           ||  |||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 412 attgcagttggagttggaggtgaaggtggaatactaccaaatggtaccatactccctaat 471

                           
Query: 328 gttggaggttatcttc 343
           ||||| || |||||||
Sbjct: 472 gttggtggatatcttc 487