Miyakogusa Predicted Gene
- Lj6g3v1915950.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1915950.1 CUFF.60154.1
(1041 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP038165 similar to UniRef100_A7NWB5 Cluster: Chromosom... 674 0.0
gnl|LJGI|TC67909 similar to UniRef100_A7NWB5 Cluster: Chromosome... 236 2e-61
>gnl|LJGI|BP038165 similar to UniRef100_A7NWB5 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (35%)
Length = 520
Score = 674 bits (340), Expect = 0.0
Identities = 352/356 (98%)
Strand = Plus / Minus
Query: 686 gaacatcatcaaaacccgtgtctccaaggcggaatgcagtttccttttcacttccaagag 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gaacatcatcaaaacccgtgtctccaaggcggaatgcagtttccttttcacttccaagag 461
Query: 746 gaaattatgatgataggagttcagtgttttcctcaggtcacggttccatgtcaggctccg 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gaaattatgatgataggagttcagtgttttcctcaggtcacggttccatgtcaggctccg 401
Query: 806 gcacaggttcacaaactgcacgaacaagagtggatggaaaggagttctttcgccaagtca 865
|||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 400 gcacaggttcaccaactgcacgaaccagagtggatggaaaggagttctttcgccaagtca 341
Query: 866 ggagccgtttggattatgagcagtttggtgcatttttagcaaatgtgaaggaactgaatt 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ggagccgtttggattatgagcagtttggtgcatttttagcaaatgtgaaggaactgaatt 281
Query: 926 cacataaacaaactaaagaggagacattaaagaaagctgatgagatctttgggcctgaaa 985
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 cacataaaccaactaaagaggagacattaaagaaagctgatgagatctttgggcctgaaa 221
Query: 986 ataaggacctctatactatatttgagggattgattactcgcaatgtccattaactt 1041
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 220 ataaggacctctatactatatttgagggattgattactcgccatgtccattaactt 165
>gnl|LJGI|TC67909 similar to UniRef100_A7NWB5 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (85%)
Length = 1300
Score = 236 bits (119), Expect = 2e-61
Identities = 411/507 (81%), Gaps = 11/507 (2%)
Strand = Plus / Plus
Query: 531 ttctgatacaggaaattcttttgctgaggaacgcgagtctgatgctgcaagaccgagagt 590
||||||||| |||||||||||||||||||| | || |||||||| |||||| |||||
Sbjct: 557 ttctgatactggaaattcttttgctgaggatcatgaatctgatgccataagacctagagt 616
Query: 591 atcacatagcctcctcttagcatcccaaactaacacccctcgctttacacctcctggatc 650
| || |||| |||||||||||||||||| ||| ||||||||| | || || ||||| ||
Sbjct: 617 accatatagtctcctcttagcatcccaatctaccacccctcggctcactccccctggttc 676
Query: 651 ccctcctagtctttctgcgtctgggtccccaacaagaacatcatcaaaacccgtgtctcc 710
||||| || || ||||| || | || || ||||||||||| ||||| ||||||||
Sbjct: 677 tcctcccagcctgtctgcatcagtatctcccacaagaacatct---aaacctgtgtctcc 733
Query: 711 aaggcggaatgcagtttccttttcacttccaagaggaaattatgatgataggagttcagt 770
||||||| || || |||||||| || ||||||| | |||||||||||| ||||||
Sbjct: 734 aaggcggcattcaatttcctttgcaacctcaagaggcatgcatgatgataggacttcagt 793
Query: 771 gttttcctc-aggtcacggttccatgtcaggctccggcacaggttcacaaactgcacgaa 829
||||||||| | |||| | | | | |||||| |||| |||||||||| |||||
Sbjct: 794 gttttcctcgatgtcaagct-------ctgactccggagcaggatcacaaactggacgaa 846
Query: 830 caagagtggatggaaaggagttctttcgccaagtcaggagccgtttggattatgagcagt 889
|| | ||||| |||||||||||||||||||||||||||| ||| ||| ||| |||||||
Sbjct: 847 cacgggtggacggaaaggagttctttcgccaagtcaggaaccggttgtcttacgagcagt 906
Query: 890 ttggtgcatttttagcaaatgtgaaggaactgaattcacataaacaaactaaagaggaga 949
| |||||||| || || ||||| ||||| |||||||| ||||||||||| | ||||| ||
Sbjct: 907 tcggtgcattcttggctaatgttaaggagctgaattcccataaacaaacaagagaggtga 966
Query: 950 cattaaagaaagctgatgagatctttgggcctgaaaataaggacctctatactatatttg 1009
| | ||||||||||||| || ||||| || ||||| |||||||| || | ||||||||
Sbjct: 967 cgctgcagaaagctgatgaaatttttggaccagaaaacaaggacctgtacaatatatttg 1026
Query: 1010 agggattgattactcgcaatgtccatt 1036
|||| ||||||||||||||||||||||
Sbjct: 1027 aggggttgattactcgcaatgtccatt 1053
Score = 161 bits (81), Expect = 1e-38
Identities = 285/353 (80%)
Strand = Plus / Plus
Query: 58 ctaccgtccgatccattcgagcaactggatgtggcacgcaggatcacctccattgcgctg 117
|||||||| ||||| ||||| ||||| || |||| |||| |||||| |||||||||||
Sbjct: 93 ctaccgtcagatcccttcgaacaactcgacctggcccgcaagatcacatccattgcgctt 152
Query: 118 tcgacacgtgtcaacgccctccagtcagagtcgtcggctctgcgcgctgagctcgccgag 177
|| ||||||||||||||||| | ||||||||||||| || ||||| | ||||||||
Sbjct: 153 tcagcacgtgtcaacgccctcgaatcagagtcgtcggaacttcgcgccaggatcgccgag 212
Query: 178 aaggagagggtcatcggcgagcttcagtctcaggtggagcctctcgacgctgcactctct 237
||||| |||||| |||||||||||| ||| |||| | |||||||| |||||||
Sbjct: 213 aaggatcacctcatcgccgagcttcagtcgcagttggactccctcgacgccacactctcc 272
Query: 238 gaaaccgcagagaagctcgctcgtgctgaggaggataaggagaggttggtgaaggagaat 297
| ||||| || || ||| ||||| || | ||||||||||| ||| | || ||||||
Sbjct: 273 gccaccgccgataacctccaccgtgccgaacaagataaggagagtttgatcaacgagaat 332
Query: 298 gcttcgctttcgaatactgtgagaaagctcagcagagatgtctccaagttggaggttttc 357
||||| ||||| || ||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 333 gcttcactttccaacactgttagaaagctcaatcgagatgtctccaagttggaggttttc 392
Query: 358 agaaggacgcttatgcactcacttcaagaggatgaccaaacttctggaggagc 410
|||| ||| ||||||| |||||||| ||||| || | | ||||||||||||
Sbjct: 393 agaaagacacttatgcgatcacttcaggaggaggatgataattctggaggagc 445