Miyakogusa Predicted Gene
- Lj6g3v1900290.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1900290.1 Non Chatacterized Hit- tr|I0Z071|I0Z071_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,28.66,6e-18,MATE EFFLUX FAMILY PROTEIN,NULL; MULTIDRUG RESISTANCE
PROTEIN,NULL; seg,NULL; MatE,Multi antimicrobi,gene.g66910.t1.1
(1194 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82338 similar to UniRef100_Q8LDE3 Cluster: Enhanced d... 890 0.0
gnl|LJGI|TC71999 similar to UniRef100_Q8LDE3 Cluster: Enhanced d... 839 0.0
gnl|LJGI|TC68853 similar to UniRef100_A7P7W6 Cluster: Chromosome... 448 e-125
gnl|LJGI|TC59031 similar to UniRef100_Q945F0 Cluster: Enhanced d... 264 1e-69
gnl|LJGI|TC60934 similar to UniRef100_A7P7W5 Cluster: Chromosome... 139 5e-32
>gnl|LJGI|TC82338 similar to UniRef100_Q8LDE3 Cluster: Enhanced disease
susceptibility 5; n=1; Arabidopsis thaliana|Rep:
Enhanced disease susceptibility 5 - Arabidopsis thaliana
(Mouse-ear cress), partial (27%)
Length = 577
Score = 890 bits (449), Expect = 0.0
Identities = 452/453 (99%)
Strand = Plus / Plus
Query: 202 gccgtcgccaaacaggatagggaggaagtgcagcatcacatatctgtcttgctttttatt 261
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 gccgccgccaaacaggatagggaggaagtgcagcatcacatatctgtcttgctttttatt 184
Query: 262 gggttaggatgtggcttggtgatgcttgtgttcacaaggttgtttgctgcagcaacacta 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gggttaggatgtggcttggtgatgcttgtgttcacaaggttgtttgctgcagcaacacta 244
Query: 322 actgcttttactgggctgaagaatgtgcatgtagtaccagcagctaatacttatgtccag 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 actgcttttactgggctgaagaatgtgcatgtagtaccagcagctaatacttatgtccag 304
Query: 382 attcgaggcttggcatggcctgctttacttattggatgggttgctcagagtgcaagtctt 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 attcgaggcttggcatggcctgctttacttattggatgggttgctcagagtgcaagtctt 364
Query: 442 ggcatgaaagattcgtggggacccttgaaagctttggctgctgccagtgttataaatgga 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ggcatgaaagattcgtggggacccttgaaagctttggctgctgccagtgttataaatgga 424
Query: 502 attggtgatatagttttatgcacctatttaggttatggtattgcaggggcagcatgggcc 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 attggtgatatagttttatgcacctatttaggttatggtattgcaggggcagcatgggcc 484
Query: 562 acattggcttcacaagttgttgctgcgtatatgatgagccaaactctaaacaataaggga 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 acattggcttcacaagttgttgctgcgtatatgatgagccaaactctaaacaataaggga 544
Query: 622 tacaatgcgtttgccttctccattccttcagct 654
|||||||||||||||||||||||||||||||||
Sbjct: 545 tacaatgcgtttgccttctccattccttcagct 577
>gnl|LJGI|TC71999 similar to UniRef100_Q8LDE3 Cluster: Enhanced disease
susceptibility 5; n=1; Arabidopsis thaliana|Rep:
Enhanced disease susceptibility 5 - Arabidopsis thaliana
(Mouse-ear cress), partial (27%)
Length = 764
Score = 839 bits (423), Expect = 0.0
Identities = 426/427 (99%)
Strand = Plus / Plus
Query: 1 atgaaggaaatcgtgaaattcacagggcctgtggcggggatttggttgtgtggaccgttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 atgaaggaaatcgtgaaattcacagggcctgtggcggggatttggttgtgtggaccgttg 397
Query: 61 atgagtctcatcgatactgcggttgttggtcagggaagctctgttgagcttgctgcttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 atgagtctcatcgatactgcggttgttggtcagggaagctctgttgagcttgctgcttta 457
Query: 121 ggtcctgcaacggttttttgtgattatttgagctacaccttcatgtttctgtcggttgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ggtcctgcaacggttttttgtgattatttgagctacaccttcatgtttctgtcggttgca 517
Query: 181 acttccaatatggttgctactgccgtcgccaaacaggatagggaggaagtgcagcatcac 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 518 acttccaatatggttgctactgccctcgccaaacaggatagggaggaagtgcagcatcac 577
Query: 241 atatctgtcttgctttttattgggttaggatgtggcttggtgatgcttgtgttcacaagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 atatctgtcttgctttttattgggttaggatgtggcttggtgatgcttgtgttcacaagg 637
Query: 301 ttgtttgctgcagcaacactaactgcttttactgggctgaagaatgtgcatgtagtacca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 ttgtttgctgcagcaacactaactgcttttactgggctgaagaatgtgcatgtagtacca 697
Query: 361 gcagctaatacttatgtccagattcgaggcttggcatggcctgctttacttattggatgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 gcagctaatacttatgtccagattcgaggcttggcatggcctgctttacttattggatgg 757
Query: 421 gttgctc 427
|||||||
Sbjct: 758 gttgctc 764
>gnl|LJGI|TC68853 similar to UniRef100_A7P7W6 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (23%)
Length = 694
Score = 448 bits (226), Expect = e-125
Identities = 229/230 (99%)
Strand = Plus / Plus
Query: 803 gagtaaatcggagtttggcaaaggctcgatcacttcttaggtctcttgtaattatcggag 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagtaaatcggagtttggcaaaggctcgatcacttcttaggtctcttgtaattatcggag 60
Query: 863 ttatacttggattgttttttgggattgttggaacatctgttccttggttattcccataca 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttatacttggattgttttttgggattgttggaacatctgttccttggttattcccataca 120
Query: 923 tttttacatctgatcagatggtcatccaggagatgcataggattctgattccatactttg 982
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 121 tttttacatctgatcagatggtcatccaggagatgcataggattttgattccatactttg 180
Query: 983 tagctctatccgtgacacccactattgtcggcctggagggaacaatgctg 1032
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tagctctatccgtgacacccactattgtcggcctggagggaacaatgctg 230
Score = 325 bits (164), Expect = 4e-88
Identities = 164/164 (100%)
Strand = Plus / Plus
Query: 1031 tgaccttgagtagtagatatggtttacaaggctgttggtttgcccttgctggatttcagt 1090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgaccttgagtagtagatatggtttacaaggctgttggtttgcccttgctggatttcagt 360
Query: 1091 ggactcgatttttatcagcccttctgcgccttctctcacccaatggcattttattctcgg 1150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggactcgatttttatcagcccttctgcgccttctctcacccaatggcattttattctcgg 420
Query: 1151 aagatttaggccagtatgagctgcaaaagttgaagactacctag 1194
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aagatttaggccagtatgagctgcaaaagttgaagactacctag 464
>gnl|LJGI|TC59031 similar to UniRef100_Q945F0 Cluster: Enhanced disease
susceptibility 5; n=2; Arabidopsis thaliana|Rep:
Enhanced disease susceptibility 5 - Arabidopsis thaliana
(Mouse-ear cress), partial (27%)
Length = 814
Score = 264 bits (133), Expect = 1e-69
Identities = 271/317 (85%)
Strand = Plus / Plus
Query: 49 tgtggaccgttgatgagtctcatcgatactgcggttgttggtcagggaagctctgttgag 108
||||||||| | ||||||||||| |||||||| ||| |||||||||||||||| |||||
Sbjct: 482 tgtggaccgcttatgagtctcattgatactgctgttattggtcagggaagctccattgag 541
Query: 109 cttgctgctttaggtcctgcaacggttttttgtgattatttgagctacaccttcatgttt 168
|||||||| ||||||||||| || ||| |||||||| | |||||||| |||||||||
Sbjct: 542 cttgctgcattaggtcctgctactgttgtttgtgataacttgagctatgtgttcatgttt 601
Query: 169 ctgtcggttgcaacttccaatatggttgctactgccgtcgccaaacaggatagggaggaa 228
|| || ||||| |||||||||||||||||||||||| | || |||||||||||||| |||
Sbjct: 602 ctatcagttgctacttccaatatggttgctactgcccttgctaaacaggatagggaagaa 661
Query: 229 gtgcagcatcacatatctgtcttgctttttattgggttaggatgtggcttggtgatgctt 288
|||||||||||||||||||||||||||||||||||| ||| ||||| || ||||||||
Sbjct: 662 gtgcagcatcacatatctgtcttgctttttattgggctagcttgtggtttcatgatgctt 721
Query: 289 gtgttcacaaggttgtttgctgcagcaacactaactgcttttactgggctgaagaatgtg 348
| |||||| || | |||| ||| ||||| || |||||||| || || | ||||||||
Sbjct: 722 ttattcacagggctatttggtgctgcaacgctcactgctttcacaggtcctaagaatgta 781
Query: 349 catgtagtaccagcagc 365
||||||||||| |||||
Sbjct: 782 catgtagtacctgcagc 798
>gnl|LJGI|TC60934 similar to UniRef100_A7P7W5 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 718
Score = 139 bits (70), Expect = 5e-32
Identities = 160/190 (84%)
Strand = Plus / Plus
Query: 791 aattgatgtatggagtaaatcggagtttggcaaaggctcgatcacttcttaggtctcttg 850
||||||| ||||||||||| ||||||||| ||||||| || ||| | ||||||||||
Sbjct: 1 aattgatatatggagtaaaccggagtttgtcaaaggcccggatgcttttgaggtctcttg 60
Query: 851 taattatcggagttatacttggattgttttttgggattgttggaacatctgttccttggt 910
| || || |||| | |||||||||||| || || ||||||||||| || ||||||||||
Sbjct: 61 tgataattggagccacacttggattgttgttaggaattgttggaacctcagttccttggt 120
Query: 911 tattcccatacatttttacatctgatcagatggtcatccaggagatgcataggattctga 970
|||| || || |||||||| |||||||||||||||||||||||||||||| | ||||
Sbjct: 121 tatttccctatgtttttacacctgatcagatggtcatccaggagatgcataaagtgctga 180
Query: 971 ttccatactt 980
||||||||||
Sbjct: 181 ttccatactt 190
Score = 83.8 bits (42), Expect = 2e-15
Identities = 126/154 (81%)
Strand = Plus / Plus
Query: 1035 cttgagtagtagatatggtttacaaggctgttggtttgcccttgctggatttcagtggac 1094
||||||||| ||||| ||||| ||||| ||||||||||||||||| |||||| ||| |
Sbjct: 317 cttgagtagcagatacggtttgcaaggttgttggtttgcccttgcattatttcaatgggc 376
Query: 1095 tcgatttttatcagcccttctgcgccttctctcacccaatggcattttattctcggaaga 1154
||| |||| || ||||| | ||| ||||| || |||| ||||||||||| | |||||||
Sbjct: 377 tcggttttcattggccctccagcgtcttctttctcccactggcattttatacgcggaaga 436
Query: 1155 tttaggccagtatgagctgcaaaagttgaagact 1188
| | |||| |||||||||||||| | ||||||
Sbjct: 437 tattaaccagaatgagctgcaaaagctaaagact 470