Miyakogusa Predicted Gene
- Lj6g3v1900270.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1900270.1 tr|B5Y5D7|B5Y5D7_PHATC Predicted protein
OS=Phaeodactylum tricornutum (strain CCAP 1055/1)
GN=PHATR_,39.56,2e-18,seg,NULL; MATE EFFLUX FAMILY PROTEIN,NULL;
MULTIDRUG RESISTANCE PROTEIN,NULL; MatE,Multi
antimicrobi,NODE_56667_length_2020_cov_35.715843.path2.1
(1587 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82338 similar to UniRef100_Q8LDE3 Cluster: Enhanced d... 444 e-124
gnl|LJGI|TC71999 similar to UniRef100_Q8LDE3 Cluster: Enhanced d... 337 1e-91
gnl|LJGI|TC68853 similar to UniRef100_A7P7W6 Cluster: Chromosome... 285 4e-76
gnl|LJGI|TC60934 similar to UniRef100_A7P7W5 Cluster: Chromosome... 226 3e-58
gnl|LJGI|TC59031 similar to UniRef100_Q945F0 Cluster: Enhanced d... 153 4e-36
gnl|LJGI|BG662386 84 3e-15
>gnl|LJGI|TC82338 similar to UniRef100_Q8LDE3 Cluster: Enhanced disease
susceptibility 5; n=1; Arabidopsis thaliana|Rep:
Enhanced disease susceptibility 5 - Arabidopsis thaliana
(Mouse-ear cress), partial (27%)
Length = 577
Score = 444 bits (224), Expect = e-124
Identities = 371/420 (88%)
Strand = Plus / Plus
Query: 490 gtgcagcatcacttatctgtcctgctttttgttgggttagcatgtggctgtgtgatgctc 549
|||||||||||| |||||||| |||||||| ||||||||| |||||||| ||||||||
Sbjct: 152 gtgcagcatcacatatctgtcttgctttttattgggttaggatgtggcttggtgatgctt 211
Query: 550 ttatctacaaagttattcggtgcagcagcactcaccgtttttactgggccaaagaatgtg 609
| | |||| ||| || | ||||||| |||| || | ||||||||||| |||||||||
Sbjct: 212 gtgttcacaaggttgtttgctgcagcaacactaactgcttttactgggctgaagaatgtg 271
Query: 610 catgtagtacctgcagcaaatacttatgtccagattcgagccttgtcatggcctgcttta 669
||||||||||| ||||| |||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 272 catgtagtaccagcagctaatacttatgtccagattcgaggcttggcatggcctgcttta 331
Query: 670 cttgttggatgggttgctcagagtgcaagtcttggtatgaaagattcctggggacccttg 729
||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 332 cttattggatgggttgctcagagtgcaagtcttggcatgaaagattcgtggggacccttg 391
Query: 730 aaggctttagctgctgccagtattataaatggagttggtgatatacttctatgcagttgt 789
|| ||||| |||||||||||| ||||||||||| ||||||||||| || |||||| | |
Sbjct: 392 aaagctttggctgctgccagtgttataaatggaattggtgatatagttttatgcacctat 451
Query: 790 ttaggctatggtattgcaggagccgcttgggccacaatggcatcacaagttgttgctgcg 849
||||| |||||||||||||| || || ||||||||| |||| ||||||||||||||||||
Sbjct: 452 ttaggttatggtattgcaggggcagcatgggccacattggcttcacaagttgttgctgcg 511
Query: 850 tatatgatgattcaagcactaaacaataagggatacaatgcacttgccttctccattcct 909
|||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 512 tatatgatgagccaaactctaaacaataagggatacaatgcgtttgccttctccattcct 571
>gnl|LJGI|TC71999 similar to UniRef100_Q8LDE3 Cluster: Enhanced disease
susceptibility 5; n=1; Arabidopsis thaliana|Rep:
Enhanced disease susceptibility 5 - Arabidopsis thaliana
(Mouse-ear cress), partial (27%)
Length = 764
Score = 337 bits (170), Expect = 1e-91
Identities = 386/458 (84%)
Strand = Plus / Plus
Query: 231 ggaactggcagaacagagtgtgtggagtcagacgaaggaaattgttaagttcacagcacc 290
||||||||| || |||| ||||||| ||||| ||||||||| || || ||||||| ||
Sbjct: 307 ggaactggcggagcagaatgtgtgggttcagatgaaggaaatcgtgaaattcacagggcc 366
Query: 291 agcaatggggctttggttgtgtgatccattgatgagtctcatcgacactgctgttgttgc 350
| |||| |||||||||||| || ||||||||||||||||| ||||| |||||||
Sbjct: 367 tgtggcggggatttggttgtgtggaccgttgatgagtctcatcgatactgcggttgttgg 426
Query: 351 tcatggaagctcaactgaacttgctgctttaggtcctgctacggtagtttgtgattatat 410
||| |||||||| ||| |||||||||||||||||||| ||||| ||||||||||| |
Sbjct: 427 tcagggaagctctgttgagcttgctgctttaggtcctgcaacggttttttgtgattattt 486
Query: 411 gaccttaaccttcatgtttctgtcggttgttacttccaatataattgctactgcccttgc 470
|| || |||||||||||||||||||||| ||||||||||| ||||||||||||| ||
Sbjct: 487 gagctacaccttcatgtttctgtcggttgcaacttccaatatggttgctactgccctcgc 546
Query: 471 taaacaggatgaagagggtgtgcagcatcacttatctgtcctgctttttgttgggttagc 530
||||||||| |||| |||||||||||| |||||||| |||||||| |||||||||
Sbjct: 547 caaacaggatagggaggaagtgcagcatcacatatctgtcttgctttttattgggttagg 606
Query: 531 atgtggctgtgtgatgctcttatctacaaagttattcggtgcagcagcactcaccgtttt 590
|||||||| |||||||| | | |||| ||| || | ||||||| |||| || | |||
Sbjct: 607 atgtggcttggtgatgcttgtgttcacaaggttgtttgctgcagcaacactaactgcttt 666
Query: 591 tactgggccaaagaatgtgcatgtagtacctgcagcaaatacttatgtccagattcgagc 650
|||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 667 tactgggctgaagaatgtgcatgtagtaccagcagctaatacttatgtccagattcgagg 726
Query: 651 cttgtcatggcctgctttacttgttggatgggttgctc 688
|||| ||||||||||||||||| |||||||||||||||
Sbjct: 727 cttggcatggcctgctttacttattggatgggttgctc 764
>gnl|LJGI|TC68853 similar to UniRef100_A7P7W6 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (23%)
Length = 694
Score = 285 bits (144), Expect = 4e-76
Identities = 344/410 (83%), Gaps = 3/410 (0%)
Strand = Plus / Plus
Query: 1133 gagtgaataggagtttggcaaaggcccgattgcttctaaggtctcttgtaattattggag 1192
|||| ||| |||||||||||||||| |||| ||||| ||||||||||||||||| ||||
Sbjct: 1 gagtaaatcggagtttggcaaaggctcgatcacttcttaggtctcttgtaattatcggag 60
Query: 1193 ctatacttggtttactgttagggatagttggaacatctcttctttggttattcccctaca 1252
||||||||| || | || ||||| |||||||||||| ||| |||||||||||| ||||
Sbjct: 61 ttatacttggattgttttttgggattgttggaacatctgttccttggttattcccataca 120
Query: 1253 tttttacacctgatcagatggtcatccaaaagatgcataggacactgattccattctttc 1312
|||||||| ||||||||||||||||||| |||||||||||| ||||||||| ||||
Sbjct: 121 tttttacatctgatcagatggtcatccaggagatgcataggattttgattccatactttg 180
Query: 1313 tagcactagctgtgacaccccctactcgaagcctagagggaacattgctggctgggcagg 1372
|||| ||| | ||||||||| ||| | |||| ||||||||| |||||||||| | ||
Sbjct: 181 tagctctatccgtgacacccactattgtcggcctggagggaacaatgctggctggacggg 240
Query: 1373 atcttagatttataagtttgtcaacatgtggatgcttttgtctgggtgctctagtattat 1432
||||||||||| |||| ||||||| ||||||||||| ||| | || |||| ||||
Sbjct: 241 atcttagatttttaagcttgtcaatgattggatgctttttgctgaatactgtagtgttat 300
Query: 1433 tgatctt---tagtagatatggtttgctaggctgttggtttacccttgctggatttcagt 1489
||| ||| ||||||||||||||| | ||||||||||||| ||||||||||||||||||
Sbjct: 301 tgaccttgagtagtagatatggtttacaaggctgttggtttgcccttgctggatttcagt 360
Query: 1490 gggctcggtttttagtggcccttctgcgccttctctctcctagtggcatt 1539
|| |||| |||||| |||||||||||||||||||| || | |||||||
Sbjct: 361 ggactcgatttttatcagcccttctgcgccttctctcacccaatggcatt 410
>gnl|LJGI|TC60934 similar to UniRef100_A7P7W5 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (19%)
Length = 718
Score = 226 bits (114), Expect = 3e-58
Identities = 344/420 (81%), Gaps = 3/420 (0%)
Strand = Plus / Plus
Query: 1123 ttgatgtatggagtgaataggagtttggcaaaggcccgattgcttctaaggtctcttgta 1182
||||| |||||||| || |||||||| |||||||||| ||||| | |||||||||||
Sbjct: 3 ttgatatatggagtaaaccggagtttgtcaaaggcccggatgcttttgaggtctcttgtg 62
Query: 1183 attattggagctatacttggtttactgttagggatagttggaacatctcttctttggtta 1242
|| |||||||| | |||||| || ||||||| || |||||||| || ||| |||||||
Sbjct: 63 ataattggagccacacttggattgttgttaggaattgttggaacctcagttccttggtta 122
Query: 1243 ttcccctacatttttacacctgatcagatggtcatccaaaagatgcataggacactgatt 1302
|| ||||| |||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 123 tttccctatgtttttacacctgatcagatggtcatccaggagatgcataaagtgctgatt 182
Query: 1303 ccattctttctagcactagctgtgacaccccctactcgaagcctagagggaacattgctg 1362
|||| ||| |||| || |||||||| |||||||||| ||||| |||||||| ||||||
Sbjct: 183 ccatacttcatagccctggctgtgacgccccctactcatagccttgagggaacgttgctg 242
Query: 1363 gctgggcaggatcttagatttataagtttgtcaacatgtggatgcttttgtctgggtgct 1422
|||||| |||||| |||| |||||||||||||| | ||||||||||| ||||||
Sbjct: 243 gctgggagggatctaagatatataagtttgtcaatgggcggatgcttttgcgtgggtgta 302
Query: 1423 ctagtattattgatctt---tagtagatatggtttgctaggctgttggtttacccttgct 1479
|||||| ||||| |||| ||| ||||| ||||||| ||| ||||||||| |||||||
Sbjct: 303 ctagtactattgttcttgagtagcagatacggtttgcaaggttgttggtttgcccttgca 362
Query: 1480 ggatttcagtgggctcggtttttagtggcccttctgcgccttctctctcctagtggcatt 1539
|||||| ||||||||||||| | ||||||| | ||| ||||| ||||| | |||||||
Sbjct: 363 ttatttcaatgggctcggttttcattggccctccagcgtcttctttctcccactggcatt 422
>gnl|LJGI|TC59031 similar to UniRef100_Q945F0 Cluster: Enhanced disease
susceptibility 5; n=2; Arabidopsis thaliana|Rep:
Enhanced disease susceptibility 5 - Arabidopsis thaliana
(Mouse-ear cress), partial (27%)
Length = 814
Score = 153 bits (77), Expect = 4e-36
Identities = 248/305 (81%)
Strand = Plus / Plus
Query: 322 atgagtctcatcgacactgctgttgttgctcatggaagctcaactgaacttgctgcttta 381
||||||||||| || ||||||||| ||| ||| |||||||| | ||| |||||||| |||
Sbjct: 494 atgagtctcattgatactgctgttattggtcagggaagctccattgagcttgctgcatta 553
Query: 382 ggtcctgctacggtagtttgtgattatatgaccttaaccttcatgtttctgtcggttgtt 441
||||||||||| || ||||||||| | ||| || ||||||||||| || |||| |
Sbjct: 554 ggtcctgctactgttgtttgtgataacttgagctatgtgttcatgtttctatcagttgct 613
Query: 442 acttccaatataattgctactgcccttgctaaacaggatgaagagggtgtgcagcatcac 501
||||||||||| |||||||||||||||||||||||||| || | ||||||||||||
Sbjct: 614 acttccaatatggttgctactgcccttgctaaacaggatagggaagaagtgcagcatcac 673
Query: 502 ttatctgtcctgctttttgttgggttagcatgtggctgtgtgatgctcttatctacaaag 561
|||||||| |||||||| ||||| |||| ||||| | ||||||| |||| ||| |
Sbjct: 674 atatctgtcttgctttttattgggctagcttgtggtttcatgatgcttttattcacaggg 733
Query: 562 ttattcggtgcagcagcactcaccgtttttactgggccaaagaatgtgcatgtagtacct 621
|||| ||||| ||| | ||||| | ||| || || || |||||||| ||||||||||||
Sbjct: 734 ctatttggtgctgcaacgctcactgctttcacaggtcctaagaatgtacatgtagtacct 793
Query: 622 gcagc 626
|||||
Sbjct: 794 gcagc 798
>gnl|LJGI|BG662386
Length = 366
Score = 83.8 bits (42), Expect = 3e-15
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 1546 acggaagaaaccaggataagccaaaagttgaggactgcttag 1587
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acggaagaaaccaggataagccaaaagttgaggactgcttag 42