Miyakogusa Predicted Gene
- Lj6g3v1900260.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1900260.1 tr|G0PPZ7|G0PPZ7_STRGR MATE efflux family protein
OS=Streptomyces griseus XylebKG-1 GN=SACT1_3967
PE,26.87,8e-18,MatE,Multi antimicrobial extrusion protein; matE: MATE
efflux family protein,Multi antimicrobial
ext,NODE_47317_length_1921_cov_39.435188.path2.1
(1347 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60934 similar to UniRef100_A7P7W5 Cluster: Chromosome... 944 0.0
gnl|LJGI|TC59031 similar to UniRef100_Q945F0 Cluster: Enhanced d... 779 0.0
gnl|LJGI|TC82338 similar to UniRef100_Q8LDE3 Cluster: Enhanced d... 472 e-132
gnl|LJGI|TC71999 similar to UniRef100_Q8LDE3 Cluster: Enhanced d... 355 5e-97
gnl|LJGI|TC68853 similar to UniRef100_A7P7W6 Cluster: Chromosome... 147 2e-34
>gnl|LJGI|TC60934 similar to UniRef100_A7P7W5 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (19%)
Length = 718
Score = 944 bits (476), Expect = 0.0
Identities = 476/476 (100%)
Strand = Plus / Plus
Query: 872 aattgatatatggagtaaaccggagtttgtcaaaggcccggatgcttttgaggtctcttg 931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aattgatatatggagtaaaccggagtttgtcaaaggcccggatgcttttgaggtctcttg 60
Query: 932 tgataattggagccacacttggattgttgttaggaattgttggaacctcagttccttggt 991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgataattggagccacacttggattgttgttaggaattgttggaacctcagttccttggt 120
Query: 992 tatttccctatgtttttacacctgatcagatggtcatccaggagatgcataaagtgctga 1051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tatttccctatgtttttacacctgatcagatggtcatccaggagatgcataaagtgctga 180
Query: 1052 ttccatacttcatagccctggctgtgacgccccctactcatagccttgagggaacgttgc 1111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttccatacttcatagccctggctgtgacgccccctactcatagccttgagggaacgttgc 240
Query: 1112 tggctgggagggatctaagatatataagtttgtcaatgggcggatgcttttgcgtgggtg 1171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggctgggagggatctaagatatataagtttgtcaatgggcggatgcttttgcgtgggtg 300
Query: 1172 tactagtactattgttcttgagtagcagatacggtttgcaaggttgttggtttgcccttg 1231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tactagtactattgttcttgagtagcagatacggtttgcaaggttgttggtttgcccttg 360
Query: 1232 cattatttcaatgggctcggttttcattggccctccagcgtcttctttctcccactggca 1291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cattatttcaatgggctcggttttcattggccctccagcgtcttctttctcccactggca 420
Query: 1292 ttttatacgcggaagatattaaccagaatgagctgcaaaagctaaagactgcttaa 1347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttttatacgcggaagatattaaccagaatgagctgcaaaagctaaagactgcttaa 476
>gnl|LJGI|TC59031 similar to UniRef100_Q945F0 Cluster: Enhanced disease
susceptibility 5; n=2; Arabidopsis thaliana|Rep:
Enhanced disease susceptibility 5 - Arabidopsis thaliana
(Mouse-ear cress), partial (27%)
Length = 814
Score = 779 bits (393), Expect = 0.0
Identities = 393/393 (100%)
Strand = Plus / Plus
Query: 1 atgtggagtcagatgaaggaaattgcaatgtttacaggtcctgctgttggactttggata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 atgtggagtcagatgaaggaaattgcaatgtttacaggtcctgctgttggactttggata 481
Query: 61 tgtggaccgcttatgagtctcattgatactgctgttattggtcagggaagctccattgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tgtggaccgcttatgagtctcattgatactgctgttattggtcagggaagctccattgag 541
Query: 121 cttgctgcattaggtcctgctactgttgtttgtgataacttgagctatgtgttcatgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 cttgctgcattaggtcctgctactgttgtttgtgataacttgagctatgtgttcatgttt 601
Query: 181 ctatcagttgctacttccaatatggttgctactgcccttgctaaacaggatagggaagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ctatcagttgctacttccaatatggttgctactgcccttgctaaacaggatagggaagaa 661
Query: 241 gtgcagcatcacatatctgtcttgctttttattgggctagcttgtggtttcatgatgctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gtgcagcatcacatatctgtcttgctttttattgggctagcttgtggtttcatgatgctt 721
Query: 301 ttattcacagggctatttggtgctgcaacgctcactgctttcacaggtcctaagaatgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ttattcacagggctatttggtgctgcaacgctcactgctttcacaggtcctaagaatgta 781
Query: 361 catgtagtacctgcagccaacacctatgtacag 393
|||||||||||||||||||||||||||||||||
Sbjct: 782 catgtagtacctgcagccaacacctatgtacag 814
>gnl|LJGI|TC82338 similar to UniRef100_Q8LDE3 Cluster: Enhanced disease
susceptibility 5; n=1; Arabidopsis thaliana|Rep:
Enhanced disease susceptibility 5 - Arabidopsis thaliana
(Mouse-ear cress), partial (27%)
Length = 577
Score = 472 bits (238), Expect = e-132
Identities = 391/442 (88%)
Strand = Plus / Plus
Query: 223 aaacaggatagggaagaagtgcagcatcacatatctgtcttgctttttattgggctagct 282
|||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 134 aaacaggatagggaggaagtgcagcatcacatatctgtcttgctttttattgggttagga 193
Query: 283 tgtggtttcatgatgcttttattcacagggctatttggtgctgcaacgctcactgctttc 342
||||| || |||||||| | |||||| || | |||| ||| ||||| || ||||||||
Sbjct: 194 tgtggcttggtgatgcttgtgttcacaaggttgtttgctgcagcaacactaactgctttt 253
Query: 343 acaggtcctaagaatgtacatgtagtacctgcagccaacacctatgtacagattcgaggc 402
|| || | |||||||| ||||||||||| ||||| || || ||||| ||||||||||||
Sbjct: 254 actgggctgaagaatgtgcatgtagtaccagcagctaatacttatgtccagattcgaggc 313
Query: 403 ttggcatggcctgctttacttgttggatgggttgctcagagtgcaagtcttggcatgaaa 462
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ttggcatggcctgctttacttattggatgggttgctcagagtgcaagtcttggcatgaaa 373
Query: 463 gattcttggggacccttgaaggctttggcagctgctagtgttataaatggcattggtgat 522
||||| |||||||||||||| |||||||| ||||| |||||||||||||| |||||||||
Sbjct: 374 gattcgtggggacccttgaaagctttggctgctgccagtgttataaatggaattggtgat 433
Query: 523 atagttttgtgcatctatttaggctatggaattgcaggagctgcatgggctacaatggca 582
|||||||| |||| ||||||||| ||||| |||||||| || |||||||| ||| ||||
Sbjct: 434 atagttttatgcacctatttaggttatggtattgcaggggcagcatgggccacattggct 493
Query: 583 tcacaagttgttgctgcttatatgatgatgcaagcgctaaacaagaagggatataatgct 642
||||||||||||||||| |||||||||| ||| | |||||||| |||||||| |||||
Sbjct: 494 tcacaagttgttgctgcgtatatgatgagccaaactctaaacaataagggatacaatgcg 553
Query: 643 tttgccttctccatcccttcag 664
|||||||||||||| |||||||
Sbjct: 554 tttgccttctccattccttcag 575
>gnl|LJGI|TC71999 similar to UniRef100_Q8LDE3 Cluster: Enhanced disease
susceptibility 5; n=1; Arabidopsis thaliana|Rep:
Enhanced disease susceptibility 5 - Arabidopsis thaliana
(Mouse-ear cress), partial (27%)
Length = 764
Score = 355 bits (179), Expect = 5e-97
Identities = 329/379 (86%)
Strand = Plus / Plus
Query: 61 tgtggaccgcttatgagtctcattgatactgctgttattggtcagggaagctccattgag 120
||||||||| | ||||||||||| |||||||| ||| |||||||||||||||| |||||
Sbjct: 386 tgtggaccgttgatgagtctcatcgatactgcggttgttggtcagggaagctctgttgag 445
Query: 121 cttgctgcattaggtcctgctactgttgtttgtgataacttgagctatgtgttcatgttt 180
|||||||| ||||||||||| || ||| |||||||| | |||||||| |||||||||
Sbjct: 446 cttgctgctttaggtcctgcaacggttttttgtgattatttgagctacaccttcatgttt 505
Query: 181 ctatcagttgctacttccaatatggttgctactgcccttgctaaacaggatagggaagaa 240
|| || ||||| |||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct: 506 ctgtcggttgcaacttccaatatggttgctactgccctcgccaaacaggatagggaggaa 565
Query: 241 gtgcagcatcacatatctgtcttgctttttattgggctagcttgtggtttcatgatgctt 300
|||||||||||||||||||||||||||||||||||| ||| ||||| || ||||||||
Sbjct: 566 gtgcagcatcacatatctgtcttgctttttattgggttaggatgtggcttggtgatgctt 625
Query: 301 ttattcacagggctatttggtgctgcaacgctcactgctttcacaggtcctaagaatgta 360
| |||||| || | |||| ||| ||||| || |||||||| || || | ||||||||
Sbjct: 626 gtgttcacaaggttgtttgctgcagcaacactaactgcttttactgggctgaagaatgtg 685
Query: 361 catgtagtacctgcagccaacacctatgtacagattcgaggcttggcatggcctgcttta 420
||||||||||| ||||| || || ||||| ||||||||||||||||||||||||||||||
Sbjct: 686 catgtagtaccagcagctaatacttatgtccagattcgaggcttggcatggcctgcttta 745
Query: 421 cttgttggatgggttgctc 439
||| |||||||||||||||
Sbjct: 746 cttattggatgggttgctc 764
>gnl|LJGI|TC68853 similar to UniRef100_A7P7W6 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (23%)
Length = 694
Score = 147 bits (74), Expect = 2e-34
Identities = 362/458 (79%)
Strand = Plus / Plus
Query: 884 gagtaaaccggagtttgtcaaaggcccggatgcttttgaggtctcttgtgataattggag 943
||||||| ||||||||| ||||||| || ||| | ||||||||||| || || ||||
Sbjct: 1 gagtaaatcggagtttggcaaaggctcgatcacttcttaggtctcttgtaattatcggag 60
Query: 944 ccacacttggattgttgttaggaattgttggaacctcagttccttggttatttccctatg 1003
| |||||||||||| || || ||||||||||| || |||||||||||||| || ||
Sbjct: 61 ttatacttggattgttttttgggattgttggaacatctgttccttggttattcccataca 120
Query: 1004 tttttacacctgatcagatggtcatccaggagatgcataaagtgctgattccatacttca 1063
|||||||| |||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 121 tttttacatctgatcagatggtcatccaggagatgcataggattttgattccatactttg 180
Query: 1064 tagccctggctgtgacgccccctactcatagccttgagggaacgttgctggctgggaggg 1123
|||| || | ||||| ||| ||| | |||| |||||||| |||||||||| |||
Sbjct: 181 tagctctatccgtgacacccactattgtcggcctggagggaacaatgctggctggacggg 240
Query: 1124 atctaagatatataagtttgtcaatgggcggatgcttttgcgtgggtgtactagtactat 1183
|||| |||| | |||| ||||||||| |||||||||| || | |||| |||
Sbjct: 241 atcttagatttttaagcttgtcaatgattggatgctttttgctgaatactgtagtgttat 300
Query: 1184 tgttcttgagtagcagatacggtttgcaaggttgttggtttgcccttgcattatttcaat 1243
|| ||||||||| ||||| ||||| ||||| ||||||||||||||||| |||||| |
Sbjct: 301 tgaccttgagtagtagatatggtttacaaggctgttggtttgcccttgctggatttcagt 360
Query: 1244 gggctcggttttcattggccctccagcgtcttctttctcccactggcattttatacgcgg 1303
|| |||| |||| || ||||| | ||| ||||| || |||| ||||||||||| | |||
Sbjct: 361 ggactcgatttttatcagcccttctgcgccttctctcacccaatggcattttattctcgg 420
Query: 1304 aagatattaaccagaatgagctgcaaaagctaaagact 1341
||||| | |||| |||||||||||||| | ||||||
Sbjct: 421 aagatttaggccagtatgagctgcaaaagttgaagact 458