Miyakogusa Predicted Gene
- Lj6g3v1898080.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1898080.1 Non Chatacterized Hit- tr|I1GZ12|I1GZ12_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,35.8,6e-18,coiled-coil,NULL,gene.g66888.t1.1
(549 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76004 weakly similar to UniRef100_A7PGG1 Cluster: Chr... 783 0.0
gnl|LJGI|TC73877 similar to UniRef100_A7PGG1 Cluster: Chromosome... 167 9e-41
>gnl|LJGI|TC76004 weakly similar to UniRef100_A7PGG1 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (61%)
Length = 1042
Score = 783 bits (395), Expect = 0.0
Identities = 395/395 (100%)
Strand = Plus / Plus
Query: 155 agatgatgcttgcagacaatcaagctgctcttgaaaagatacagtgggaatcaatgatat 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 agatgatgcttgcagacaatcaagctgctcttgaaaagatacagtgggaatcaatgatat 599
Query: 215 ccaacaagaaagcagagaaacttcaagaagagataggttccatgcaaggagatctttcat 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ccaacaagaaagcagagaaacttcaagaagagataggttccatgcaaggagatctttcat 659
Query: 275 catttacattgctacttgaaggcctgacaataacagacaatgctgaatacattgatgatt 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 catttacattgctacttgaaggcctgacaataacagacaatgctgaatacattgatgatt 719
Query: 335 atgatattaagccttatgttcactccaatcaccttcctagcattgatgatttggacgaga 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 atgatattaagccttatgttcactccaatcaccttcctagcattgatgatttggacgaga 779
Query: 395 tggaaatgcataaaatcgaagaagcaagaaaagcttataatgttgctgttgcttatgcga 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 tggaaatgcataaaatcgaagaagcaagaaaagcttataatgttgctgttgcttatgcga 839
Query: 455 aagaaaaacaggatcaagaatctattgctgctgctgccaatgctaggttacatcttcaat 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 aagaaaaacaggatcaagaatctattgctgctgctgccaatgctaggttacatcttcaat 899
Query: 515 caattcttttcaaacccaaaatttcctctttgtag 549
|||||||||||||||||||||||||||||||||||
Sbjct: 900 caattcttttcaaacccaaaatttcctctttgtag 934
Score = 196 bits (99), Expect = 1e-49
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 1 atgagttctgttaatgagaaacttgatgaactgaaacaccaggctgcacaaaaggactct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 atgagttctgttaatgagaaacttgatgaactgaaacaccaggctgcacaaaaggactct 502
Query: 61 ttgctgaagtctacacaacaacaactctttgatgtgaag 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ttgctgaagtctacacaacaacaactctttgatgtgaag 541
>gnl|LJGI|TC73877 similar to UniRef100_A7PGG1 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (57%)
Length = 1241
Score = 167 bits (84), Expect = 9e-41
Identities = 302/374 (80%), Gaps = 3/374 (0%)
Strand = Plus / Plus
Query: 162 gcttgcagacaatcaagctgctcttgaaaagatacagtgggaatcaatgatatccaacaa 221
||||||||| || |||||||| ||||||||||||| |||||| |||||| |||||||||
Sbjct: 714 gcttgcagataaacaagctgcatttgaaaagatacaatgggaaacaatgacatccaacaa 773
Query: 222 gaaagcagagaaacttcaagaagagataggttccatgcaaggagatctttcatcatttac 281
||||| |||||||| |||| ||| ||| |||||| |||| |||| ||||| |||| ||
Sbjct: 774 gaaagtggagaaactccaaggcgagctagattccattcaagcagatatttcaacattcac 833
Query: 282 attgctacttgaaggcctgacaataacagacaatgctgaatacattgatgattatgatat 341
||| | |||||| || |||||| ||| || | || |||||| |||||||||||| |
Sbjct: 834 gttgttgcttgaaagcttgacaaaaactgatactgtgaaatacactgatgattatgacac 893
Query: 342 taagccttatgttcactccaatcaccttcctagcattgatgatttggacgagatggaaat 401
|||||||||| | | |||||| | || |||||||||||||| ||||| ||| |
Sbjct: 894 caagccttatgat---ttcaatcagcgggctgatattgatgatttggatgagatagaatt 950
Query: 402 gcataaaatcgaagaagcaagaaaagcttataatgttgctgttgcttatgcgaaagaaaa 461
| | ||||| |||||||||||||| ||||||| | ||| |||||| || || |||||
Sbjct: 951 gtagaaaatggaagaagcaagaaaggcttatatttctgcggttgctgttgtcaaggaaaa 1010
Query: 462 acaggatcaagaatctattgctgctgctgccaatgctaggttacatcttcaatcaattct 521
|| ||| |||||||||||||||||||||||| |||||||||||| ||||||||| | |
Sbjct: 1011 acgagatgaagaatctattgctgctgctgccagtgctaggttacaccttcaatcattcat 1070
Query: 522 tttcaaacccaaaa 535
||||||| ||||||
Sbjct: 1071 tttcaaatccaaaa 1084
Score = 79.8 bits (40), Expect = 2e-14
Identities = 67/76 (88%)
Strand = Plus / Plus
Query: 19 aaacttgatgaactgaaacaccaggctgcacaaaaggactctttgctgaagtctacacaa 78
||||||||||| || |||||||||| | || ||||||||||||| ||||||| |||||||
Sbjct: 628 aaacttgatgagcttaaacaccaggtttcagaaaaggactctttactgaagtatacacaa 687
Query: 79 caacaactctttgatg 94
||||| |||| |||||
Sbjct: 688 caacagctctctgatg 703