Miyakogusa Predicted Gene
- Lj6g3v1882470.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1882470.1 Non Chatacterized Hit- tr|I1M144|I1M144_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.36097
PE,63.43,0,SUBFAMILY NOT NAMED,NULL; MAHOGUNIN,NULL; RING/U-box,NULL;
Ring finger,Zinc finger, RING-type; ZF_RI,CUFF.60157.1
(1161 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60234 similar to UniRef100_A7NWF8 Cluster: Chromosome... 260 2e-68
gnl|LJGI|TC64184 similar to UniRef100_A7NWF8 Cluster: Chromosome... 98 1e-19
>gnl|LJGI|TC60234 similar to UniRef100_A7NWF8 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (62%)
Length = 1531
Score = 260 bits (131), Expect = 2e-68
Identities = 284/335 (84%)
Strand = Plus / Plus
Query: 811 cctcacatgcaaataactcagtgtgtcttacagagaagcaatggtggcggtgctttccag 870
|||||||||||||||||||| ||||||| ||| ||||| |||| | ||| | ||||||
Sbjct: 844 cctcacatgcaaataactcaagctgtcttagagaaaagcagtggtagtggtccattccag 903
Query: 871 ataaaagtagttaggcagattctgtggattgatggtgttcgttatgagttgagggagtta 930
||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||
Sbjct: 904 gtaaaagtagttaggcagattctgtggattgatgatgttcgttatgagctgagagagtta 963
Query: 931 tatggaataggaagctcaggagcaacagattttgataacagtgaaccagggaaagattgt 990
|| ||||||||||||||| |||| | ||||||||| | | ||| || ||| || |||
Sbjct: 964 tacggaataggaagctcaacagcagcggattttgatgataatgatcctcagaaggaatgt 1023
Query: 991 gtaatatgcatgattgaaccaaaagataccgctgtcttaccttgtcgacacatgtgtatg 1050
||||||||||||| |||||| || || || |||||||||||||| |||||||||||||||
Sbjct: 1024 gtaatatgcatgactgaacccaaggacactgctgtcttaccttgccgacacatgtgtatg 1083
Query: 1051 tgcagtgagtgtgccaaaactctgaggcttcagtccaacaaatgccctatatgccgtcaa 1110
|||||||| ||||| ||| | || | || || || ||||||||||||||||||||
Sbjct: 1084 tgcagtgactgtgcgaaagaattacggttacaatcaaataaatgccctatatgccgtcag 1143
Query: 1111 tctattgaggaacttatagagatcaagatgaacaa 1145
||||||| |||||||||||||||||||| |||||
Sbjct: 1144 cctattgaagaacttatagagatcaagataaacaa 1178
Score = 131 bits (66), Expect = 1e-29
Identities = 159/190 (83%)
Strand = Plus / Plus
Query: 511 gtttttgatgctgtttatgatggcagcatcaccatcatctacttcgccaatgaagaagag 570
|||||||||||| ||||||||||||||||||| ||| |||||| ||||| ||||||||
Sbjct: 538 gtttttgatgctctttatgatggcagcatcacaatctactactttgccaaagaagaagaa 597
Query: 571 agatgcaggtttgttccgctatttcctgatatatttgagccagtaagagtcccctttcag 630
| |||||||||| ||| ||||||||||| |||||||||| | | |||| ||||||
Sbjct: 598 aaatgcaggtttactccactatttcctgaagcatttgagccaatcactttcccatttcag 657
Query: 631 aaaggagttggccagaaatttgttcagccttcaggaacggggactgacctaagcatcttt 690
||||||| ||||| ||| ||| ||||||||||||||| || | ||||||| | |||||
Sbjct: 658 aaaggagctggcctgaagttttgtcagccttcaggaacaggcattgacctaggtttcttt 717
Query: 691 gagttggatg 700
||||||||||
Sbjct: 718 gagttggatg 727
>gnl|LJGI|TC64184 similar to UniRef100_A7NWF8 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 767
Score = 97.6 bits (49), Expect = 1e-19
Identities = 112/133 (84%)
Strand = Plus / Plus
Query: 511 gtttttgatgctgtttatgatggcagcatcaccatcatctacttcgccaatgaagaagag 570
|||||||||||| ||||||||||||||||||| ||| |||||| ||||| ||||||||
Sbjct: 623 gtttttgatgctctttatgatggcagcatcacaatctactactttgccaaagaagaagaa 682
Query: 571 agatgcaggtttgttccgctatttcctgatatatttgagccagtaagagtcccctttcag 630
| |||||||||| ||| ||||||||||| |||||||||| | | |||| ||||||
Sbjct: 683 aaatgcaggtttactccactatttcctgaagcatttgagccaatcactttcccatttcag 742
Query: 631 aaaggagttggcc 643
||||||| |||||
Sbjct: 743 aaaggagctggcc 755