Miyakogusa Predicted Gene

Lj6g3v1880100.3

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1880100.3 Non Chatacterized Hit- tr|K4AXM8|K4AXM8_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,46.34,4e-19,
,CUFF.60056.3
         (360 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62227 similar to UniRef100_A7NWH3 Cluster: Chromosome...   714   0.0  
gnl|LJGI|TC62390 similar to UniRef100_A7NWH3 Cluster: Chromosome...    78   4e-14

>gnl|LJGI|TC62227 similar to UniRef100_A7NWH3 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (14%)
          Length = 713

 Score =  714 bits (360), Expect = 0.0
 Identities = 360/360 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaactggaagatgatctatattttgcagatttgagcaaggaaattgccctcctacta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 atggaactggaagatgatctatattttgcagatttgagcaaggaaattgccctcctacta 159

                                                                       
Query: 61  atggatgaacatgaagacccacttgcttcttatcctgcagactctcttcaggtatttcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 atggatgaacatgaagacccacttgcttcttatcctgcagactctcttcaggtatttcct 219

                                                                       
Query: 121 ggagcaattcaatatcctcctccacagtttgcattcctgtatgagcaggctttgagaaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 ggagcaattcaatatcctcctccacagtttgcattcctgtatgagcaggctttgagaaga 279

                                                                       
Query: 181 gatcagagcaaagggacaggggtgtttatcccacaagcaacacagccaataagaaggaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 gatcagagcaaagggacaggggtgtttatcccacaagcaacacagccaataagaaggaag 339

                                                                       
Query: 241 cagaggaagggaagatacaacaattcatactcagcaaattatcaaaagcagtctcaagac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 cagaggaagggaagatacaacaattcatactcagcaaattatcaaaagcagtctcaagac 399

                                                                       
Query: 301 acaacaataatggcttctcaagctcctcctatcaaggattccttgaaatccagaaattaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 acaacaataatggcttctcaagctcctcctatcaaggattccttgaaatccagaaattaa 459


>gnl|LJGI|TC62390 similar to UniRef100_A7NWH3 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (69%)
          Length = 838

 Score = 77.8 bits (39), Expect = 4e-14
 Identities = 114/137 (83%), Gaps = 9/137 (6%)
 Strand = Plus / Plus

                                                                       
Query: 119 ctggagcaattcaatatcctcctccacagtttgcattcctgtatgagcaggctttgagaa 178
           |||||||||||||   |||||| ||||||| |||  |||| |||||||||| ||||||||
Sbjct: 536 ctggagcaattca---tcctcccccacagtctgctatcctctatgagcaggttttgagaa 592

                                                                       
Query: 179 gagatcagagcaaagggacaggggtgtttatcccacaagcaacacagccaataagaagga 238
           ||   || |||||||||||||| |||||||| || ||  ||||||||||   ||||||||
Sbjct: 593 ga---caaagcaaagggacaggagtgtttattcctcagtcaacacagcc---aagaagga 646

                            
Query: 239 agcagaggaagggaaga 255
           |||| ||||| ||||||
Sbjct: 647 agcaaaggaaaggaaga 663