Miyakogusa Predicted Gene

Lj6g3v1879920.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1879920.1 Non Chatacterized Hit- tr|E1Z2G6|E1Z2G6_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,33.5,2e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; RNA
PSEUDOURIDYLATE SYNTHASE FAMILY
PROTEIN,NULL,NODE_71802_length_816_cov_7.406863.path1.1
         (804 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW595398 similar to UniRef100_A7QUL6 Cluster: Chromosom...   896   0.0  

>gnl|LJGI|BW595398 similar to UniRef100_A7QUL6 Cluster: Chromosome chr10 scaffold_179,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr10 scaffold_179, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (17%)
          Length = 484

 Score =  896 bits (452), Expect = 0.0
 Identities = 452/452 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcctcggtggcggtggcgtcaatgttcttcgccggcgactgtcggagtttcgccgtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33  atggcctcggtggcggtggcgtcaatgttcttcgccggcgactgtcggagtttcgccgtg 92

                                                                       
Query: 61  cctcctgtctcgcgcgcacttcgcaattcgctcaacaagcacgcgttcagttggcgctgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93  cctcctgtctcgcgcgcacttcgcaattcgctcaacaagcacgcgttcagttggcgctgt 152

                                                                       
Query: 121 cggagctcacacggtagtaaccctgcaatcaccggagaatctgtaacctccacaattgac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 cggagctcacacggtagtaaccctgcaatcaccggagaatctgtaacctccacaattgac 212

                                                                       
Query: 181 gacgccggaaacttaccttccgcctcttcctcctccaatagctacccgaagtatgatcga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 gacgccggaaacttaccttccgcctcttcctcctccaatagctacccgaagtatgatcga 272

                                                                       
Query: 241 ttgcttccatgtccactgcacaaatctccaccaagaatcgaacacttggttgtttcagaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ttgcttccatgtccactgcacaaatctccaccaagaatcgaacacttggttgtttcagaa 332

                                                                       
Query: 301 ggaggacctgtattggagtatatttgcaagtcactggatcttcctcctctttttgttgca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ggaggacctgtattggagtatatttgcaagtcactggatcttcctcctctttttgttgca 392

                                                                       
Query: 361 gatttgatacaatttggagctgtatactatgctcttgttccccctcaacctcctcctagt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gatttgatacaatttggagctgtatactatgctcttgttccccctcaacctcctcctagt 452

                                           
Query: 421 gctactccagagcaaatgaggatattcaaaca 452
           ||||||||||||||||||||||||||||||||
Sbjct: 453 gctactccagagcaaatgaggatattcaaaca 484