Miyakogusa Predicted Gene
- Lj6g3v1879870.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1879870.1 Non Chatacterized Hit- tr|F6H114|F6H114_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,24.51,1e-18,PPR,Pentatricopeptide repeat; PPR_2,Pentatricopeptide
repeat; FAMILY NOT NAMED,NULL; PPR: pentatrico,CUFF.60027.1
(1183 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73690 1088 0.0
gnl|LJGI|TC70227 724 0.0
>gnl|LJGI|TC73690
Length = 611
Score = 1088 bits (549), Expect = 0.0
Identities = 552/553 (99%)
Strand = Plus / Plus
Query: 1 atggcgtcccgtctccgccactctctccgccgctactccaccatcctctccccaaactca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 atggcgtcccgtctccgccactctctccgccgctactccaccatcctctccccaaactca 118
Query: 61 tcaacgccactaaccgcaaaggagaagtcaagaaccgccctccacctcctcaaatccgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 tcaacgccactaaccgcaaaggagaagtcaagaaccgccctccacctcctcaaatccgaa 178
Query: 121 accaacccggaacgcatcctcgacatctgccgcgccgcctctctcaccccggacttccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 accaacccggaacgcatcctcgacatctgccgcgccgcctctctcaccccggacttccac 238
Query: 181 ctcgaccgcatcgccctctccgtcgccatctccaaactcaaagacggcaaccacttctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ctcgaccgcatcgccctctccgtcgccatctccaaactcaaagacggcaaccacttctcc 298
Query: 241 accatcgaccaattcctccgcgacctccccacctcccgccctgacctccgcaacgagcgt 300
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 299 accatcgaccaattcctccgcgacctccccacctcccgccctgacctccacaacgagcgt 358
Query: 301 ttcctctcgcaatccatcgtgctctacggccaggccagaatgctccccaacgccgtcacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ttcctctcgcaatccatcgtgctctacggccaggccagaatgctccccaacgccgtcacc 418
Query: 361 gccttcactcgcatgcgcgacgagtttcaaatcaccccctccgtcaagtccctcaatgcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gccttcactcgcatgcgcgacgagtttcaaatcaccccctccgtcaagtccctcaatgcc 478
Query: 421 ctcctcttcgctgctctcattgccaaggactacaaagaggtatctcgaatctacctcgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ctcctcttcgctgctctcattgccaaggactacaaagaggtatctcgaatctacctcgat 538
Query: 481 ttcccgaaaaattattcgattcaacccgacgtagaaacgtataatacagttattaagtcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ttcccgaaaaattattcgattcaacccgacgtagaaacgtataatacagttattaagtcg 598
Query: 541 tttgctgaatctg 553
|||||||||||||
Sbjct: 599 tttgctgaatctg 611
>gnl|LJGI|TC70227
Length = 710
Score = 724 bits (365), Expect = 0.0
Identities = 378/381 (99%), Gaps = 1/381 (0%)
Strand = Plus / Plus
Query: 804 gatttctggagggcgaaagccgaattgggttagtttctctcatttgattcatgggtattg 863
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 3 gatttctggagggcgaaagccgaattgggttagtttctcgcatttgattcatgggtattg 62
Query: 864 ctgggaagggaaccttg-atgaggctaagaaggtgtttgctgacatgaagaaaaggggtt 922
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 ctgggaagggaaccttgtatgaggctaagaaggtgtttgctgacatgaagaaaaggggtt 122
Query: 923 acaagcctgaatcgccttgttattttacactggctcattttctgtgtgaaggtggggatt 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 acaagcctgaatcgccttgttattttacactggctcattttctgtgtgaaggtggggatt 182
Query: 983 tcgagtctgctttcgagattacaaaggaaagtatggataaaggttgggttcctaatttca 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tcgagtctgctttcgagattacaaaggaaagtatggataaaggttgggttcctaatttca 242
Query: 1043 ccaccatgaaaaaacttgtgactgggcttgttggtgtctccaagactgatgatgctaaag 1102
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 243 ccaccatgaaaaaacttgtgactgggcttgttggtgtctcccagactgatgatgctaaag 302
Query: 1103 agctcattaagcaagtcaaggagaagtttactgaaagcagcgacaagtgggacgaaattg 1162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 agctcattaagcaagtcaaggagaagtttactgaaagcagcgacaagtgggacgaaattg 362
Query: 1163 aagctgagttgattaagtgat 1183
|||||||||||||||||||||
Sbjct: 363 aagctgagttgattaagtgat 383