Miyakogusa Predicted Gene
- Lj6g3v1879850.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1879850.1 Non Chatacterized Hit- tr|I1MR67|I1MR67_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,78.1,0,FAMILY NOT
NAMED,NULL; DUF1084,Domain of unknown function DUF1084;
seg,NULL,CUFF.60026.1
(885 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71254 similar to UniRef100_A7R0M6 Cluster: Chromosome... 549 e-155
gnl|LJGI|GO023496 similar to UniRef100_Q402F0 Cluster: Tobamovir... 139 3e-32
gnl|LJGI|AV780549 homologue to UniRef100_A7R0M6 Cluster: Chromos... 92 7e-18
>gnl|LJGI|TC71254 similar to UniRef100_A7R0M6 Cluster: Chromosome chr10 scaffold_312,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_312, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (63%)
Length = 701
Score = 549 bits (277), Expect = e-155
Identities = 280/281 (99%)
Strand = Plus / Plus
Query: 605 ccatgctgaggcgtttcccaattgaatcaaagggtagaaggaagaagcttaatgaggtcg 664
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 12 ccatgctgaggcgtttcccaattgaatcaaagggttgaaggaagaagcttaatgaggtcg 71
Query: 665 gatgtgtcacagcaatctgtttcacctgttttctgataagatgcttgatggtttttatat 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 gatgtgtcacagcaatctgtttcacctgttttctgataagatgcttgatggtttttatat 131
Query: 725 ctgcatttgattctgatgcatcacttgatgttttagatcatccaattttggattttatct 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 ctgcatttgattctgatgcatcacttgatgttttagatcatccaattttggattttatct 191
Query: 785 actacatgctggttgagatcgtgccttcagctttagtactcttcatcctgcgcaaattgc 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 actacatgctggttgagatcgtgccttcagctttagtactcttcatcctgcgcaaattgc 251
Query: 845 cgccgaagagaatatcagctcaatatcaccctatccgttag 885
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 cgccgaagagaatatcagctcaatatcaccctatccgttag 292
>gnl|LJGI|GO023496 similar to UniRef100_Q402F0 Cluster: Tobamovirus multiplication 1
homolog 3; n=1; Solanum lycopersicum|Rep: Tobamovirus
multiplication 1 homolog 3 - Solanum lycopersicum
(Tomato) (Lycopersicon esculentum), partial (22%)
Length = 452
Score = 139 bits (70), Expect = 3e-32
Identities = 139/162 (85%)
Strand = Plus / Plus
Query: 724 tctgcatttgattctgatgcatcacttgatgttttagatcatccaattttggattttatc 783
|||||||||||||| |||||||| || |||||||| || ||||| ||| |||| || |||
Sbjct: 32 tctgcatttgattcagatgcatctctagatgttttggaccatcctattctggacttaatc 91
Query: 784 tactacatgctggttgagatcgtgccttcagctttagtactcttcatcctgcgcaaattg 843
||||| ||||||||||||| | |||||||||||||| |||| |||||||||| ||||
Sbjct: 92 tactatgtgctggttgagattctaccttcagctttagtcctctacatcctgcgccgattg 151
Query: 844 ccgccgaagagaatatcagctcaatatcaccctatccgttag 885
||||| ||||| |||||||| ||||||||| ||||| |||||
Sbjct: 152 ccgcccaagaggatatcagcccaatatcacgctatctgttag 193
>gnl|LJGI|AV780549 homologue to UniRef100_A7R0M6 Cluster: Chromosome chr10
scaffold_312, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr10 scaffold_312, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (20%)
Length = 570
Score = 91.7 bits (46), Expect = 7e-18
Identities = 82/94 (87%)
Strand = Plus / Minus
Query: 792 gctggttgagatcgtgccttcagctttagtactcttcatcctgcgcaaattgccgccgaa 851
|||||||||||| | |||||||||||||| |||| |||||||||| ||||||||| ||
Sbjct: 478 gctggttgagattctaccttcagctttagtcctctacatcctgcgccgattgccgcccaa 419
Query: 852 gagaatatcagctcaatatcaccctatccgttag 885
||| |||||||| ||||||||| ||||| |||||
Sbjct: 418 gaggatatcagcccaatatcacgctatctgttag 385