Miyakogusa Predicted Gene

Lj6g3v1878810.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1878810.1 Non Chatacterized Hit- tr|K3ZWX2|K3ZWX2_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si031104,53.19,8e-19,HSP20,Alpha crystallin/Hsp20 domain; no
description,NULL; HSP20-like chaperones,HSP20-like
chaperone,CUFF.60023.1
         (411 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69998 similar to UniRef100_A7R0M1 Cluster: Chromosome...   807   0.0  
gnl|LJGI|TC63924 similar to UniRef100_A7R0M1 Cluster: Chromosome...   527   e-149

>gnl|LJGI|TC69998 similar to UniRef100_A7R0M1 Cluster: Chromosome chr10 scaffold_312,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr10 scaffold_312, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (63%)
          Length = 696

 Score =  807 bits (407), Expect = 0.0
 Identities = 410/411 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagttcccagcaccttatgcagttccatggcagtaccttctccctcataaccgcctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35  atggagttcccagcaccttatgcagttccatggcagtaccttctccctcataaccgcctc 94

                                                                       
Query: 61  tctccctacaacatcatcccagaaaactatgttcagtggacagaaacacctgaatctcac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  tctccctacaacatcatcccagaaaactatgttcagtggacagaaacacctgaatctcac 154

                                                                       
Query: 121 attttctcagctgacatccctggggtgaggaaagaagagctcaaggtggaacttgaggac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 attttctcagctgacatccctggggtgaggaaagaagagctcaaggtggaacttgaggac 214

                                                                       
Query: 181 tcaaggtaccttataatcagaactgtagcagtggatgaatccacagagcctgcgaggaaa 240
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 tcaaagtaccttataatcagaactgtagcagtggatgaatccacagagcctgcgaggaaa 274

                                                                       
Query: 241 ttcaagaggaagttccggctgcccgcgagggttgatcttgatggcatcactgctggatat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ttcaagaggaagttccggctgcccgcgagggttgatcttgatggcatcactgctggatat 334

                                                                       
Query: 301 gaagatggtgtcttaactgttacagttccaagatcattaaggagagatttctatattgac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gaagatggtgtcttaactgttacagttccaagatcattaaggagagatttctatattgac 394

                                                              
Query: 361 gtttctgatgagcttgggagagtaggagttcttgcaagtgctgcttgattt 411
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gtttctgatgagcttgggagagtaggagttcttgcaagtgctgcttgattt 445


>gnl|LJGI|TC63924 similar to UniRef100_A7R0M1 Cluster: Chromosome chr10 scaffold_312,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr10 scaffold_312, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (63%)
          Length = 764

 Score =  527 bits (266), Expect = e-149
 Identities = 269/270 (99%)
 Strand = Plus / Plus

                                                                       
Query: 142 ggggtgaggaaagaagagctcaaggtggaacttgaggactcaaggtaccttataatcaga 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ggggtgaggaaagaagagctcaaggtggaacttgaggactcaaggtaccttataatcaga 356

                                                                       
Query: 202 actgtagcagtggatgaatccacagagcctgcgaggaaattcaagaggaagttccggctg 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 actgtagcagtggatgaatccacagagcctgcgaggaaattcaagaggaagttccggctg 416

                                                                       
Query: 262 cccgcgagggttgatcttgatggcatcactgctggatatgaagatggtgtcttaactgtt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 cccgcgagggttgatcttgatggcatcactgctggatatgaagatggtgtcttaactgtt 476

                                                                       
Query: 322 acagttccaagatcattaaggagagatttctatattgacgtttctgatgagcttgggaga 381
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 acggttccaagatcattaaggagagatttctatattgacgtttctgatgagcttgggaga 536

                                         
Query: 382 gtaggagttcttgcaagtgctgcttgattt 411
           ||||||||||||||||||||||||||||||
Sbjct: 537 gtaggagttcttgcaagtgctgcttgattt 566



 Score =  268 bits (135), Expect = 2e-71
 Identities = 141/143 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagttcccagcaccttatgcagttccatggcagtaccttctccctcataaccgcctc 60
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35  atggagttcccggcaccttatgcagttccatggcagtaccttctccctcataaccgcctc 94

                                                                       
Query: 61  tctccctacaacatcatcccagaaaactatgttcagtggacagaaacacctgaatctcac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  tctccctacaacatcatcccagaaaactatgttcagtggacagaaacacctgaatctcac 154

                                  
Query: 121 attttctcagctgacatccctgg 143
           ||||||||||| |||||||||||
Sbjct: 155 attttctcagccgacatccctgg 177