Miyakogusa Predicted Gene
- Lj6g3v1878810.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1878810.1 Non Chatacterized Hit- tr|K3ZWX2|K3ZWX2_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si031104,53.19,8e-19,HSP20,Alpha crystallin/Hsp20 domain; no
description,NULL; HSP20-like chaperones,HSP20-like
chaperone,CUFF.60023.1
(411 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69998 similar to UniRef100_A7R0M1 Cluster: Chromosome... 807 0.0
gnl|LJGI|TC63924 similar to UniRef100_A7R0M1 Cluster: Chromosome... 527 e-149
>gnl|LJGI|TC69998 similar to UniRef100_A7R0M1 Cluster: Chromosome chr10 scaffold_312,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_312, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (63%)
Length = 696
Score = 807 bits (407), Expect = 0.0
Identities = 410/411 (99%)
Strand = Plus / Plus
Query: 1 atggagttcccagcaccttatgcagttccatggcagtaccttctccctcataaccgcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35 atggagttcccagcaccttatgcagttccatggcagtaccttctccctcataaccgcctc 94
Query: 61 tctccctacaacatcatcccagaaaactatgttcagtggacagaaacacctgaatctcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 tctccctacaacatcatcccagaaaactatgttcagtggacagaaacacctgaatctcac 154
Query: 121 attttctcagctgacatccctggggtgaggaaagaagagctcaaggtggaacttgaggac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 attttctcagctgacatccctggggtgaggaaagaagagctcaaggtggaacttgaggac 214
Query: 181 tcaaggtaccttataatcagaactgtagcagtggatgaatccacagagcctgcgaggaaa 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 tcaaagtaccttataatcagaactgtagcagtggatgaatccacagagcctgcgaggaaa 274
Query: 241 ttcaagaggaagttccggctgcccgcgagggttgatcttgatggcatcactgctggatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ttcaagaggaagttccggctgcccgcgagggttgatcttgatggcatcactgctggatat 334
Query: 301 gaagatggtgtcttaactgttacagttccaagatcattaaggagagatttctatattgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gaagatggtgtcttaactgttacagttccaagatcattaaggagagatttctatattgac 394
Query: 361 gtttctgatgagcttgggagagtaggagttcttgcaagtgctgcttgattt 411
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gtttctgatgagcttgggagagtaggagttcttgcaagtgctgcttgattt 445
>gnl|LJGI|TC63924 similar to UniRef100_A7R0M1 Cluster: Chromosome chr10 scaffold_312,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_312, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (63%)
Length = 764
Score = 527 bits (266), Expect = e-149
Identities = 269/270 (99%)
Strand = Plus / Plus
Query: 142 ggggtgaggaaagaagagctcaaggtggaacttgaggactcaaggtaccttataatcaga 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ggggtgaggaaagaagagctcaaggtggaacttgaggactcaaggtaccttataatcaga 356
Query: 202 actgtagcagtggatgaatccacagagcctgcgaggaaattcaagaggaagttccggctg 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 actgtagcagtggatgaatccacagagcctgcgaggaaattcaagaggaagttccggctg 416
Query: 262 cccgcgagggttgatcttgatggcatcactgctggatatgaagatggtgtcttaactgtt 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 cccgcgagggttgatcttgatggcatcactgctggatatgaagatggtgtcttaactgtt 476
Query: 322 acagttccaagatcattaaggagagatttctatattgacgtttctgatgagcttgggaga 381
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 acggttccaagatcattaaggagagatttctatattgacgtttctgatgagcttgggaga 536
Query: 382 gtaggagttcttgcaagtgctgcttgattt 411
||||||||||||||||||||||||||||||
Sbjct: 537 gtaggagttcttgcaagtgctgcttgattt 566
Score = 268 bits (135), Expect = 2e-71
Identities = 141/143 (98%)
Strand = Plus / Plus
Query: 1 atggagttcccagcaccttatgcagttccatggcagtaccttctccctcataaccgcctc 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35 atggagttcccggcaccttatgcagttccatggcagtaccttctccctcataaccgcctc 94
Query: 61 tctccctacaacatcatcccagaaaactatgttcagtggacagaaacacctgaatctcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 tctccctacaacatcatcccagaaaactatgttcagtggacagaaacacctgaatctcac 154
Query: 121 attttctcagctgacatccctgg 143
||||||||||| |||||||||||
Sbjct: 155 attttctcagccgacatccctgg 177