Miyakogusa Predicted Gene
- Lj6g3v1874670.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1874670.1 tr|A4F2M4|A4F2M4_PHAVU Starch synthase III
OS=Phaseolus vulgaris GN=PvSSIII PE=2 SV=1,75.08,0,STARCH
SYNTHASE,NULL; GLYCOSYLTRANSFERASE,NULL;
Glycogen_synth,Glycogen/starch synthases, ADP-glucos,CUFF.60087.1
(3417 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS324734 similar to UniRef100_Q9XGC0 Cluster: Starch sy... 894 0.0
gnl|LJGI|DC595297 homologue to UniRef100_Q9XGC0 Cluster: Starch ... 803 0.0
gnl|LJGI|TC75479 similar to UniRef100_Q9XGC0 Cluster: Starch syn... 749 0.0
gnl|LJGI|TC77300 525 e-148
gnl|LJGI|TC79079 homologue to UniRef100_Q43846 Cluster: Soluble ... 311 2e-83
>gnl|LJGI|FS324734 similar to UniRef100_Q9XGC0 Cluster: Starch synthase isoform SS
III; n=1; Vigna unguiculata|Rep: Starch synthase isoform
SS III - Vigna unguiculata (Cowpea), partial (6%)
Length = 689
Score = 894 bits (451), Expect = 0.0
Identities = 540/570 (94%), Gaps = 6/570 (1%)
Strand = Plus / Plus
Query: 1 atggagatgtcatctttgccattaaaccttaaaaccacgttccctgacagaggcggcggt 60
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 126 atggagatgtcttctttgccattaaaccttaaaacaacgttccctgacagaggcggcggt 185
Query: 61 tgtttgaagctcccgccgttttctgggttcttccttcgtcatccagtaacagcttcaact 120
|||||||||||| |||||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 186 tgtttgaagctcacgccgttttctgggttcttccttcgtcatccagtaacaactgcagct 245
Query: 121 agctaccaaagttcagggtgcaaggcaggttggggtggtttctgcgtcaaggctagtagt 180
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ggctatcaaagttcagggtgcaaggcaggttggggtggtttctgcgtcaaggctagtagt 305
Query: 181 gcagatttttctaggaggagacagcagaagaaggtgtcaattgcaaggcctaaggattct 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 306 gcagatttttctaggaggagacagcagaagaaggtgtcaattgcaaggcctaaggactct 365
Query: 241 gctcccaagggttttgccccaaaattacctgttagagcaagtagcaagaacaccagtaaa 300
|| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 366 gcacccaagggttttgccccaaaatcacctgttagagcaagcagcaagaacaccagtaaa 425
Query: 301 aagaaagctagtgtcaagaagggagattcgttaactccaaccgttagtgagattcccggg 360
|||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 426 aagaaagctactgtcaagaagggagattcgttaactccaaccgtcagtgagattcccggg 485
Query: 361 gatggtaataaacaaacactcgatgtgaatgtgaatattgatgatgataaccatggggtt 420
|| ||||||||||||||||||| ||||||||| |||| |||||||||| ||||||
Sbjct: 486 gacggtaataaacaaacactcg------atgtgaatactgataatgataaccaaggggtt 539
Query: 421 aagagcaaccgaggtgaggaaactggagatgtttctactgttgatgaggatgttattgtt 480
| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 540 acgagcaaccgaggtgaggaaattggagatgtttctacaactgatgaggatgttattgtt 599
Query: 481 ctcaaatcacgggaggggatttcttacaatggagatgttgggattgttaatgattcagag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 600 ctcaaatcacgggaggggatttcttacaatggagatgttgggattgttaatgaatcagag 659
Query: 541 gaaaggacattggactatgcagaaattgat 570
||||||||||||||||||||||||||||||
Sbjct: 660 gaaaggacattggactatgcagaaattgat 689
>gnl|LJGI|DC595297 homologue to UniRef100_Q9XGC0 Cluster: Starch synthase isoform SS
III; n=1; Vigna unguiculata|Rep: Starch synthase isoform
SS III - Vigna unguiculata (Cowpea), partial (12%)
Length = 425
Score = 803 bits (405), Expect = 0.0
Identities = 420/425 (98%)
Strand = Plus / Plus
Query: 2755 gttgaaggaaaaagagctgccaaggaagccttgcaacaaaagcttggtttagaaactgca 2814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttgaaggaaaaagagctgccaaggaagccttgcaacaaaagcttggtttagaaactgca 60
Query: 2815 gaccttcctttggtaggagttattactcgattaactcatcagaaagggatccatctcatc 2874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaccttcctttggtaggagttattactcgattaactcatcagaaagggatccatctcatc 120
Query: 2875 aaacatgccatttggcgtacactagaacgtggtggacaggttgtattacttggttcggct 2934
|||||||||||||||||| | | |||||||||||||| |||||||||||||||||||||
Sbjct: 121 aaacatgccatttggcgtggagtggaacgtggtggacaagttgtattacttggttcggct 180
Query: 2935 ccagatccccgtatccaaaatgattttgtgaatttggccaatcagttgcactcctctcat 2994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccagatccccgtatccaaaatgattttgtgaatttggccaatcagttgcactcctctcat 240
Query: 2995 aatggtcaggctagattttgcctcgcatatgatgagcctctttcacacttgatatatgct 3054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aatggtcaggctagattttgcctcgcatatgatgagcctctttcacacttgatatatgct 300
Query: 3055 ggtgctgatttcattttagttccttcaatctttgagccatgtggacttactcaacttgtt 3114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggtgctgatttcattttagttccttcaatctttgagccatgtggacttactcaacttgtt 360
Query: 3115 gcaatgagatacggttcaatacctgttgttcgaaaaactggaggactttacgatacagta 3174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcaatgagatacggttcaatacctgttgttcgaaaaactggaggactttacgatacagta 420
Query: 3175 tttga 3179
|||||
Sbjct: 421 tttga 425
>gnl|LJGI|TC75479 similar to UniRef100_Q9XGC0 Cluster: Starch synthase isoform SS III;
n=1; Vigna unguiculata|Rep: Starch synthase isoform SS
III - Vigna unguiculata (Cowpea), partial (15%)
Length = 764
Score = 749 bits (378), Expect = 0.0
Identities = 390/394 (98%)
Strand = Plus / Plus
Query: 1713 atttttgctgtctcaaaagcatattgtctttaccgagcctcttgatgttcaagcagggag 1772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 atttttgctgtctcaaaagcatattgtctttaccgagcctcttgatgttcaagcagggag 174
Query: 1773 catagtgacagtattttacaatccctccaacacaaatctaaatggaaaacctgaggtttg 1832
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 175 catagtgacagtattttacaatccctccaacacaaatctgaaaggaaaacctgaggtttg 234
Query: 1833 gtttagatgctcatttaatcgttggtctcatcgcattggcccattgccacctcagagaat 1892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 gtttagatgctcatttaatcgttggtctcatcgcattggcccattgccacctcagagaat 294
Query: 1893 gttgcctgcagataatggcactcatgtcaaagcctctgttaaggttccactggatgcata 1952
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 295 gttgcctgcagataatggcactcatgtcaaagcctgtgttaaggttccactggatgcata 354
Query: 1953 catgatggactttgtattctctgagagtgaaagtggtggagtttttgacaataaatttgg 2012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 catgatggactttgtattctctgagagtgaaagtggtggagtttttgacaataaatttgg 414
Query: 2013 aatggattatcacataccagtttttggaggtattgtaaaggaaccacctttgcatatcat 2072
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 aatggattatcacataccagtttttggaggtattgtaaaggaaccacctttgcatatcac 474
Query: 2073 ccatattgctgttgagatggccccgattgcaaag 2106
||||||||||||||||||||||||||||||||||
Sbjct: 475 ccatattgctgttgagatggccccgattgcaaag 508
Score = 111 bits (56), Expect = 3e-23
Identities = 56/56 (100%)
Strand = Plus / Plus
Query: 1599 gctgatatacagaaaacttcaggaggataggaagttaagagaggaaacaatacgtg 1654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctgatatacagaaaacttcaggaggataggaagttaagagaggaaacaatacgtg 56
>gnl|LJGI|TC77300
Length = 511
Score = 525 bits (265), Expect = e-148
Identities = 265/265 (100%)
Strand = Plus / Minus
Query: 1 atggagatgtcatctttgccattaaaccttaaaaccacgttccctgacagaggcggcggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atggagatgtcatctttgccattaaaccttaaaaccacgttccctgacagaggcggcggt 206
Query: 61 tgtttgaagctcccgccgttttctgggttcttccttcgtcatccagtaacagcttcaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tgtttgaagctcccgccgttttctgggttcttccttcgtcatccagtaacagcttcaact 146
Query: 121 agctaccaaagttcagggtgcaaggcaggttggggtggtttctgcgtcaaggctagtagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 agctaccaaagttcagggtgcaaggcaggttggggtggtttctgcgtcaaggctagtagt 86
Query: 181 gcagatttttctaggaggagacagcagaagaaggtgtcaattgcaaggcctaaggattct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 gcagatttttctaggaggagacagcagaagaaggtgtcaattgcaaggcctaaggattct 26
Query: 241 gctcccaagggttttgccccaaaat 265
|||||||||||||||||||||||||
Sbjct: 25 gctcccaagggttttgccccaaaat 1
>gnl|LJGI|TC79079 homologue to UniRef100_Q43846 Cluster: Soluble starch synthase 3,
chloroplast precursor; n=1; Solanum tuberosum|Rep:
Soluble starch synthase 3, chloroplast precursor -
Solanum tuberosum (Potato), partial (5%)
Length = 570
Score = 311 bits (157), Expect = 2e-83
Identities = 175/181 (96%)
Strand = Plus / Plus
Query: 3237 ttttgatggggctgatgctggaggtgttgattatgcactcaatagggcaatatctgcgtg 3296
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 ttttgatggggctgatgctggaggtgttgattatgcactccatagggcaatatctgcgtg 60
Query: 3297 gtatgatggccgtgattggtttaacagtttatgcaagagggtgatggagcaagactggtc 3356
|||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 gtatgatgaccgtgactggtttaacagtctatgcaagagggtgatggagcaagactggtc 120
Query: 3357 ttggaaccggcctgctcttgactatttggagctttaccatgcagcacgcaagttgctatg 3416
|||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 121 ttggtaccggcctgctcttgactatttggagctttaccatgccgcacgcaagttgctatg 180
Query: 3417 a 3417
|
Sbjct: 181 a 181