Miyakogusa Predicted Gene
- Lj6g3v1812030.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1812030.1 tr|O82805|O82805_PEA Knotted1-like class I
homeodomain protein OS=Pisum sativum GN=PsKn1 PE=2
SV=1,76.94,0,HOMEOBOX_2,Homeodomain; ELK,ELK; HOMEOBOX_1,Homeobox,
conserved site; Homeodomain,Homeodomain; HOMEO,CUFF.59946.1
(1134 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|NP7225981 GB|AY790246.1|AAX21345.1 homeobox knotted-1-l... 961 0.0
gnl|LJGI|BP036080 similar to UniRef100_A3QNN5 Cluster: Homeodoma... 212 4e-54
gnl|LJGI|TC76769 homeobox knotted-1-like protein KNOX2;homeobox ... 111 1e-23
gnl|LJGI|TC72803 UniRef100_A5Y4H1 Cluster: Class I KNOX homeobox... 86 6e-16
>gnl|LJGI|NP7225981 GB|AY790246.1|AAX21345.1 homeobox knotted-1-like protein
KNOX1;homeobox transcription factor; LjKN1
Length = 543
Score = 961 bits (485), Expect = 0.0
Identities = 506/513 (98%)
Strand = Plus / Plus
Query: 412 gcagcctatgtcaattgtcaaaaggtgggagcaccaccagaagtggtggcgaggttggaa 471
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 gcagcctatgtcagttgtcaaaaggtgggagcaccaccagaagtggtggcgaggttggaa 72
Query: 472 gaagcgtgcggttctgcggtggggatggccggtgatgctgttgggtcaggttgtattggt 531
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 73 gaagcgtgcggttctgcggtggggatggccggtgatgctgttgggtcaggtagtattggt 132
Query: 532 gaagatccagctctggatcagttcatggaggcttactgtgagatgctgaccaagtatgag 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gaagatccagctctggatcagttcatggaggcttactgtgagatgctgaccaagtatgag 192
Query: 592 caagagctctccaaaccattaaaggaagccatgctcttccttcaaaggatcgagtttcag 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 caagagctctccaaaccattaaaggaagccatgctcttccttcaaaggatcgagtttcag 252
Query: 652 ttcaaaaatctcacagtttcttctgacgttggttgtaatgagggcactgaaaggaacact 711
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ttcaaaaatctcacagcttcttctgacgttggttgtaatgagggcactgaaaggaacact 312
Query: 712 ggatcatctgaagaggatgctgatctatacaacatgatagatcctcaggcagaggacagg 771
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ggatcatctgacgaggatgctgatctatacaacatgatagatcctcaggcagaggacagg 372
Query: 772 gaattaaagggtcagcttttgcgtaagtatagcggatacttggggagtttgaagcaggaa 831
|||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 373 gaattaaagggtcagcttttgcgtaagtatagcggatacttgggaagttcgaagcaggaa 432
Query: 832 ttcatgaagaagaggaagaaaggaaagctaccaaaagaagcaaggcaacaattacttgaa 891
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 433 ttcatgaagaagaggaagaaaggaaagctaccaaaagaagcaaggcaacaatttcttgaa 492
Query: 892 tggtggagcagacattacaaatggccttaccca 924
|||||||||||||||||||||||||||||||||
Sbjct: 493 tggtggagcagacattacaaatggccttaccca 525
>gnl|LJGI|BP036080 similar to UniRef100_A3QNN5 Cluster: Homeodomain protein Kn1; n=1;
Prunus dulcis|Rep: Homeodomain protein Kn1 - Prunus
dulcis (Almond) (Prunus amygdalus), partial (21%)
Length = 395
Score = 212 bits (107), Expect = 4e-54
Identities = 158/175 (90%)
Strand = Plus / Minus
Query: 887 ttgaatggtggagcagacattacaaatggccttacccatctgaatcacagaagctggcac 946
|||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 395 ttgaatggtggagcagacattacaaatggccttacccatcggaatcacagaagcttgcgc 336
Query: 947 tggcagagtcaacaggtttggatcagaaacaaataaacaactggtttatcaatcaaagga 1006
| |||||| |||||||| |||||||||| ||||| |||||||||||||||||||| ||||
Sbjct: 335 ttgcagaggcaacaggtctggatcagaagcaaattaacaactggtttatcaatcagagga 276
Query: 1007 aacggcactggaagccttcagaggatatgcagtttatggttgtggacccaagcca 1061
||||||||||||| ||||| || || ||||| |||||||| |||| ||||||||
Sbjct: 275 aacggcactggaaaccttctgatgacatgcaatttatggtgatggaaccaagcca 221
>gnl|LJGI|TC76769 homeobox knotted-1-like protein KNOX2;homeobox transcription factor;
LjKN2
Length = 1740
Score = 111 bits (56), Expect = 1e-23
Identities = 122/144 (84%)
Strand = Plus / Plus
Query: 903 acattacaaatggccttacccatctgaatcacagaagctggcactggcagagtcaacagg 962
||||||||||||||| || || || |||||| ||||| ||||| | || |||||||| ||
Sbjct: 1325 acattacaaatggccatatccttcggaatcagagaaggtggcattagctgagtcaactgg 1384
Query: 963 tttggatcagaaacaaataaacaactggtttatcaatcaaaggaaacggcactggaagcc 1022
|||||||||||| || |||||||||||||| || ||||||||||| |||| ||||| ||
Sbjct: 1385 tttggatcagaagcagataaacaactggttcattaatcaaaggaagaggcattggaaacc 1444
Query: 1023 ttcagaggatatgcagtttatggt 1046
|| || || ||||||||||||||
Sbjct: 1445 atctgaagacatgcagtttatggt 1468
>gnl|LJGI|TC72803 UniRef100_A5Y4H1 Cluster: Class I KNOX homeobox transcription factor;
n=1; Medicago truncatula|Rep: Class I KNOX homeobox
transcription factor - Medicago truncatula (Barrel
medic), partial (22%)
Length = 484
Score = 85.7 bits (43), Expect = 6e-16
Identities = 100/119 (84%)
Strand = Plus / Plus
Query: 919 tacccatctgaatcacagaagctggcactggcagagtcaacaggtttggatcagaaacaa 978
|||||||| ||||| || |||| ||||| ||||| || || || ||||||| ||| ||
Sbjct: 1 tacccatcggaatctcaaaagcaagcacttgcagaatccactggattggatctgaagcag 60
Query: 979 ataaacaactggtttatcaatcaaaggaaacggcactggaagccttcagaggatatgca 1037
|||||||||||||| |||||||| || ||||| || ||||||||||| |||||||||||
Sbjct: 61 ataaacaactggttcatcaatcagagaaaacgtcattggaagccttctgaggatatgca 119