Miyakogusa Predicted Gene
- Lj6g3v1753030.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1753030.1 Non Chatacterized Hit- tr|I3S030|I3S030_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,51.28,0.66,seg,NULL,CUFF.59872.1
(402 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW630095 similar to UniRef100_O82343 Cluster: Expressed... 775 0.0
gnl|LJGI|BW596436 similar to UniRef100_O82343 Cluster: Expressed... 105 2e-22
gnl|LJGI|TC59597 similar to UniRef100_O82343 Cluster: Expressed ... 68 4e-11
gnl|LJGI|TC59295 similar to UniRef100_A7PZQ8 Cluster: Chromosome... 60 1e-08
>gnl|LJGI|BW630095 similar to UniRef100_O82343 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (7%)
Length = 485
Score = 775 bits (391), Expect = 0.0
Identities = 401/403 (99%), Gaps = 1/403 (0%)
Strand = Plus / Plus
Query: 1 atgttggcttcggttttaatgacagcaatttctcgggttctccggattgagatcactacc 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 atgttggcttcggtttcaatgacagcaatttctcgggttctccggattgagatcactacc 134
Query: 61 gatccgccgcctaattcagacatcgccgccaccgccaacgcttaccaggttcgccacggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 gatccgccgcctaattcagacatcgccgccaccgccaacgcttaccaggttcgccacggc 194
Query: 121 aagaggaaacgcgaagatgaagagacggttgaagagttgccctctggggcaaactccgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 aagaggaaacgcgaagatgaagagacggttgaagagttgccctctggggcaaactccgac 254
Query: 181 agggttctccggattgagatcactaccgatccgccacctaattcagacatcgccgccacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 agggttctccggattgagatcactaccgatccgccacctaattcagacatcgccgccacc 314
Query: 241 gccaacgcttaccagttcgccacggcaagaggaaacgcgaagatgaagagacggttgaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gccaacgcttaccagttcgccacggcaagaggaaacgcgaagatgaagagacggttgaag 374
Query: 301 agttgccctctggggcaaacaacgatgattcaactgttgttagggttaaaa-cctgcata 359
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 375 agttgccctctggggcaaacaacgatgattcaactgttgttagggttaaaaccctgcata 434
Query: 360 tcaattctcttatcttagctgccaaaagcactttcttccttaa 402
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tcaattctcttatcttagctgccaaaagcactttcttccttaa 477
>gnl|LJGI|BW596436 similar to UniRef100_O82343 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (14%)
Length = 495
Score = 105 bits (53), Expect = 2e-22
Identities = 62/65 (95%)
Strand = Plus / Plus
Query: 71 ctaattcagacatcgccgccaccgccaacgcttaccaggttcgccacggcaagaggaaac 130
|||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 170 ctaagtcagacatcgccgccaccgtcaacgctgaccaggttcgccacggcaagaggaaac 229
Query: 131 gcgaa 135
|||||
Sbjct: 230 gcgaa 234
Score = 89.7 bits (45), Expect = 1e-17
Identities = 61/65 (93%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 218 ctaattcagacatcgccgccaccgccaacgcttaccag-ttcgccacggcaagaggaaac 276
|||| ||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||
Sbjct: 170 ctaagtcagacatcgccgccaccgtcaacgctgaccaggttcgccacggcaagaggaaac 229
Query: 277 gcgaa 281
|||||
Sbjct: 230 gcgaa 234
Score = 73.8 bits (37), Expect = 7e-13
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 335 tgttgttagggttaaaa-cctgcatatcaattctcttatcttagctgccaaaagcacttt 393
|||||| || ||||||| |||||||||||||||||||||||| ||||| || ||||||||
Sbjct: 348 tgttgtcagtgttaaaatcctgcatatcaattctcttatcttggctgctaagagcacttt 407
Query: 394 cttcc 398
|||||
Sbjct: 408 cttcc 412
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 280 aagatgaagagacggttgaagagttgccctctggggcaaacaacgatgattcaac 334
|||||||||||||||||||||||||| | ||||| | ||||||| ||||||||||
Sbjct: 269 aagatgaagagacggttgaagagttgtcttctggtgtaaacaacaatgattcaac 323
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 134 aagatgaagagacggttgaagagttg 159
||||||||||||||||||||||||||
Sbjct: 269 aagatgaagagacggttgaagagttg 294
>gnl|LJGI|TC59597 similar to UniRef100_O82343 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (23%)
Length = 792
Score = 67.9 bits (34), Expect = 4e-11
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 333 actgttgttagggttaaaac-ctgcatatcaattctcttatcttagctgccaaaagcact 391
||||||||||| |||||||| |||||||||| |||||||||| | ||||| |||||| ||
Sbjct: 283 actgttgttagagttaaaacactgcatatcagttctcttatcctggctgctaaaagccct 342
Query: 392 ttcttc 397
||||||
Sbjct: 343 ttcttc 348
>gnl|LJGI|TC59295 similar to UniRef100_A7PZQ8 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 1623
Score = 60.0 bits (30), Expect = 1e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 174 ctccgacagggttctccggattgagatcactaccgatccgccacctaattcagacatc 231
||||| |||||||||||||||||||||| | || |||||||||||||||||||||
Sbjct: 201 ctccgtcagggttctccggattgagatcgtgtctgacccgccacctaattcagacatc 258