Miyakogusa Predicted Gene

Lj6g3v1752830.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1752830.1 tr|B9IH40|B9IH40_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_575904 PE=4
SV=1,45.83,4e-17,coiled-coil,NULL; seg,NULL,CUFF.59855.1
         (393 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65966 similar to UniRef100_A7Q332 Cluster: Chromosome...   565   e-161

>gnl|LJGI|TC65966 similar to UniRef100_A7Q332 Cluster: Chromosome chr12 scaffold_47,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_47, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (30%)
          Length = 675

 Score =  565 bits (285), Expect = e-161
 Identities = 285/285 (100%)
 Strand = Plus / Plus

                                                                       
Query: 109 cttcaaaagatgatgctcaatgaacctaaacaattcaattccaattccaatgccttttct 168
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 cttcaaaagatgatgctcaatgaacctaaacaattcaattccaattccaatgccttttct 225

                                                                       
Query: 169 caccctgaattgatcactccatcaaggtcttcttcaccaccccatgtttctctttctctc 228
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 caccctgaattgatcactccatcaaggtcttcttcaccaccccatgtttctctttctctc 285

                                                                       
Query: 229 tggccagcatcacaagatcaggactacagaagaagtgtccaaaccccagtttcaatgaac 288
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 tggccagcatcacaagatcaggactacagaagaagtgtccaaaccccagtttcaatgaac 345

                                                                       
Query: 289 ttttgccccacaagtacttatgcacatgcacaagtttcagagaagaaggtgtatgagtgt 348
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ttttgccccacaagtacttatgcacatgcacaagtttcagagaagaaggtgtatgagtgt 405

                                                        
Query: 349 gactctggctctgatcctggtgttgacacttctcttcacctgtaa 393
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gactctggctctgatcctggtgttgacacttctcttcacctgtaa 450



 Score =  111 bits (56), Expect = 3e-24
 Identities = 56/56 (100%)
 Strand = Plus / Plus

                                                                   
Query: 1   atgggtaggaaaagccaagaccccactgttgttagctcctccattgctcttctaca 56
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58  atgggtaggaaaagccaagaccccactgttgttagctcctccattgctcttctaca 113