Miyakogusa Predicted Gene

Lj6g3v1742810.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1742810.1 Non Chatacterized Hit- tr|A2X1J8|A2X1J8_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,35.84,2e-18,DUF588,Uncharacterised protein family UPF0497,
trans-membrane plant; seg,NULL; A_tha_TIGR01569: plan,CUFF.59853.1
         (609 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BF177670 similar to UniRef100_A7R385 Cluster: Chromosom...   622   e-178

>gnl|LJGI|BF177670 similar to UniRef100_A7R385 Cluster: Chromosome undetermined
           scaffold_490, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_490,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (49%)
          Length = 325

 Score =  622 bits (314), Expect = e-178
 Identities = 324/326 (99%), Gaps = 1/326 (0%)
 Strand = Plus / Plus

                                                                       
Query: 284 gtgtcgtgagtatgatcagaggaaaagtactcttcagcaagcctttagcttgggccattt 343
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gtgtcctgagtatgatcagaggaaaagtactcttcagcaagcctttagcttgggccattt 60

                                                                       
Query: 344 tttctggtgatcaggtaatggcatatataacagtggctgcagtggcggccgctgcgcaat 403
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tttctggtgatcaggtaatggcatatataacagtggctgcagtggcggccgctgcgcaat 120

                                                                       
Query: 404 ctgctatgtttgcaaagcttggccaaccagaactgcaatggatgaagatatgtgacatgt 463
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctgctatgtttgcaaagcttggccaaccagaactgcaatggatgaagatatgtgacatgt 180

                                                                       
Query: 464 atggcaaattctgcaatcaagttggagaagggttagctagtgcattcctggctagtctta 523
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atggcaaattctgcaatcaagttggagaagggttagctagtgcattcctggctagtctta 240

                                                                       
Query: 524 gtatggtggtcctgtcatgtatctctgctttcagcctcttccgcttgtataatggcggta 583
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 241 gtatggtggtcctgtcatgtatctctgctttcagcctcttccgcttgtataatggc-gta 299

                                     
Query: 584 acaaaataaaaaatccaaattggtag 609
           ||||||||||||||||||||||||||
Sbjct: 300 acaaaataaaaaatccaaattggtag 325