Miyakogusa Predicted Gene

Lj6g3v1742770.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1742770.1 Non Chatacterized Hit- tr|B9G3I3|B9G3I3_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,36.3,2e-17,Tudor-like domain present in plant
sequences,Tudor-like, plant; seg,NULL; Agenet,Agenet-like
domain,NODE_13386_length_2477_cov_51.039967.path2.1
         (1035 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP076558 weakly similar to UniRef100_A9V2M5 Cluster: Pr...   353   1e-96
gnl|LJGI|AU251457 similar to UniRef100_A7Q958 Cluster: Chromosom...    54   2e-06

>gnl|LJGI|BP076558 weakly similar to UniRef100_A9V2M5 Cluster: Predicted protein; n=1;
            Monosiga brevicollis MX1|Rep: Predicted protein -
            Monosiga brevicollis MX1, partial (4%)
          Length = 492

 Score =  353 bits (178), Expect = 1e-96
 Identities = 178/178 (100%)
 Strand = Plus / Minus

                                                                        
Query: 858  tgatgcctttgtcgaagaagacaaggacaactctggtggtggaagtgatggtagcactga 917
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492  tgatgcctttgtcgaagaagacaaggacaactctggtggtggaagtgatggtagcactga 433

                                                                        
Query: 918  caatgacggcggcgctgacaaaactgaagagagcgaggaaaacgtgatgatggaggagag 977
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432  caatgacggcggcgctgacaaaactgaagagagcgaggaaaacgtgatgatggaggagag 373

                                                                      
Query: 978  ctttgattgtgctggagcaaaacttgatgcagcggaagcaatacaagttgcatgatga 1035
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372  ctttgattgtgctggagcaaaacttgatgcagcggaagcaatacaagttgcatgatga 315


>gnl|LJGI|AU251457 similar to UniRef100_A7Q958 Cluster: Chromosome chr19 scaffold_66,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_66, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (7%)
          Length = 389

 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 109 aaggttggtgacaagatagaggttctctctaatgatagtggcattagaggatgctggtt 167
           ||||||| ||||||||||||| | |||| | | ||||||||||| ||||| ||||||||
Sbjct: 292 aaggttgatgacaagatagagttgctctgtcaggatagtggcatcagaggttgctggtt 350