Miyakogusa Predicted Gene
- Lj6g3v1721640.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1721640.3 tr|B9NCM8|B9NCM8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_590992 PE=4
SV=1,63.64,7e-19,seg,NULL; HEAVY-METAL-ASSOCIATED DOMAIN-CONTAINING
PROTEIN,NULL; COPPER TRANSPORT PROTEIN ATOX1-RELA,CUFF.59847.3
(711 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61439 similar to UniRef100_O81922 Cluster: Proline-ri... 1402 0.0
gnl|LJGI|BG662015 similar to UniRef100_UPI000034F1BC Cluster: me... 424 e-118
gnl|LJGI|DC595319 similar to UniRef100_O81922 Cluster: Proline-r... 90 2e-17
gnl|LJGI|TC80197 similar to UniRef100_A1YL94 Cluster: Proline-ri... 86 3e-16
gnl|LJGI|TC74028 similar to UniRef100_A7R7G2 Cluster: Chromosome... 64 1e-09
>gnl|LJGI|TC61439 similar to UniRef100_O81922 Cluster: Proline-rich protein; n=1;
Capsicum annuum|Rep: Proline-rich protein - Capsicum
annuum (Bell pepper), partial (38%)
Length = 1131
Score = 1402 bits (707), Expect = 0.0
Identities = 710/711 (99%)
Strand = Plus / Plus
Query: 1 atgaagctcaaggttgatcttgaatgtgagaaatgctacaaaaaggtcaagaaaattctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 atgaagctcaaggttgatcttgaatgtgagaaatgctacaaaaaggtcaagaaaattctc 172
Query: 61 tgcaagttccctcaaattcgagaccagaagtacgacgagaaggacaacattgtgttcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 tgcaagttccctcaaattcgagaccagaagtacgacgagaaggacaacattgtgttcatt 232
Query: 121 accgtggtatgctgtagccctgagaagattagggacaagctatgttgcaaaggtgggggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 accgtggtatgctgtagccctgagaagattagggacaagctatgttgcaaaggtgggggt 292
Query: 181 accatcaagagcattgagatagtggaactgccgaagcccaaaccgcctgagcctgagaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 accatcaagagcattgagatagtggaactgccgaagcccaaaccgcctgagcctgagaag 352
Query: 241 aagaaggaggccgacaagccgaaggcggctgagcatgagaagaagaaagacggggaaaag 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 353 aagaaggaggccgacaagcccaaggcggctgagcatgagaagaagaaagacggggaaaag 412
Query: 301 cccaaggctgctgctgagcctgagaagaagaaggattccgagaagcccaaggcggcggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 cccaaggctgctgctgagcctgagaagaagaaggattccgagaagcccaaggcggcggag 472
Query: 361 cctgagaaaaagaaagatggggacaaggaaaagcccaagtcagatgggccaaagaaggga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 cctgagaaaaagaaagatggggacaaggaaaagcccaagtcagatgggccaaagaaggga 532
Query: 421 gatgagaagcccaaggacaaacccgcacccggtccgataccggtccacccagtggggcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 gatgagaagcccaaggacaaacccgcacccggtccgataccggtccacccagtggggcca 592
Query: 481 ccgccaatggcagtgccagttgggatgatgtatgctccaactccttgttacgagggcagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ccgccaatggcagtgccagttgggatgatgtatgctccaactccttgttacgagggcagg 652
Query: 541 cctgccgggccgggcttctatgagtatggtgggccgatgccatgttatgacgggtattat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 cctgccgggccgggcttctatgagtatggtgggccgatgccatgttatgacgggtattat 712
Query: 601 gcgaggcccgtttatgatagttatggtggaagcagaccctattatgtgaacaatcggtgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 gcgaggcccgtttatgatagttatggtggaagcagaccctattatgtgaacaatcggtgt 772
Query: 661 gatcagtatttcagtgaagaaaatccaacagggtgctcaattatgtgatca 711
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 gatcagtatttcagtgaagaaaatccaacagggtgctcaattatgtgatca 823
>gnl|LJGI|BG662015 similar to UniRef100_UPI000034F1BC Cluster: metal ion binding; n=1;
Arabidopsis thaliana|Rep: metal ion binding -
Arabidopsis thaliana, partial (70%)
Length = 450
Score = 424 bits (214), Expect = e-118
Identities = 214/214 (100%)
Strand = Plus / Plus
Query: 1 atgaagctcaaggttgatcttgaatgtgagaaatgctacaaaaaggtcaagaaaattctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 atgaagctcaaggttgatcttgaatgtgagaaatgctacaaaaaggtcaagaaaattctc 296
Query: 61 tgcaagttccctcaaattcgagaccagaagtacgacgagaaggacaacattgtgttcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tgcaagttccctcaaattcgagaccagaagtacgacgagaaggacaacattgtgttcatt 356
Query: 121 accgtggtatgctgtagccctgagaagattagggacaagctatgttgcaaaggtgggggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 accgtggtatgctgtagccctgagaagattagggacaagctatgttgcaaaggtgggggt 416
Query: 181 accatcaagagcattgagatagtggaactgccga 214
||||||||||||||||||||||||||||||||||
Sbjct: 417 accatcaagagcattgagatagtggaactgccga 450
>gnl|LJGI|DC595319 similar to UniRef100_O81922 Cluster: Proline-rich protein; n=1;
Capsicum annuum|Rep: Proline-rich protein - Capsicum
annuum (Bell pepper), partial (25%)
Length = 316
Score = 89.7 bits (45), Expect = 2e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 31 aaatgctacaaaaaggtcaagaaaattctctgcaagttccctcaaattcgagaccag 87
||||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 131 aaatgctacaaaaaggtcaagaaggttctctgcaaattccctcaaattcgagaccag 187
>gnl|LJGI|TC80197 similar to UniRef100_A1YL94 Cluster: Proline-rich protein; n=1;
Gossypium hirsutum|Rep: Proline-rich protein - Gossypium
hirsutum (Upland cotton) (Gossypium mexicanum), partial
(26%)
Length = 275
Score = 85.7 bits (43), Expect = 3e-16
Identities = 76/87 (87%)
Strand = Plus / Plus
Query: 1 atgaagctcaaggttgatcttgaatgtgagaaatgctacaaaaaggtcaagaaaattctc 60
|||||||||| ||||||||| |||| ||||||||||| ||||||||||| |||||
Sbjct: 146 atgaagctcagcgttgatcttcaatgcagcaaatgctacaagaaggtcaagaaggttctc 205
Query: 61 tgcaagttccctcaaattcgagaccag 87
||||| |||||||||||||||||||||
Sbjct: 206 tgcaaattccctcaaattcgagaccag 232
>gnl|LJGI|TC74028 similar to UniRef100_A7R7G2 Cluster: Chromosome undetermined
scaffold_1755, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_1755,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (16%)
Length = 581
Score = 63.9 bits (32), Expect = 1e-09
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 595 tattatgcgaggcccgtttatgatagttatggtggaagcagacc 638
||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 184 tattatggaaggcccgtgtatgatagttatggtggaagcagacc 227