Miyakogusa Predicted Gene
- Lj6g3v1721630.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1721630.1 CUFF.59843.1
(795 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72134 weakly similar to UniRef100_Q7XG81 Cluster: Hea... 906 0.0
gnl|LJGI|TC69101 similar to UniRef100_A7QEU2 Cluster: Chromosome... 52 5e-06
>gnl|LJGI|TC72134 weakly similar to UniRef100_Q7XG81 Cluster: Heavy metal-associated
domain containing protein, expressed; n=2; Oryza
sativa|Rep: Heavy metal-associated domain containing
protein, expressed - Oryza sativa subsp. japonica
(Rice), partial (56%)
Length = 693
Score = 906 bits (457), Expect = 0.0
Identities = 464/465 (99%), Gaps = 1/465 (0%)
Strand = Plus / Plus
Query: 73 gatgatgaacagcctccagagatagttctcaaggttgatatgcattgtcaagcctgtgca 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 gatgatgaacagcctccagagatagttctcaaggttgatatgcattgtcaagcctgtgca 272
Query: 133 aggaaagttgcaaaatctttgaaaggatttgaaggagtggaggaggtgagtgcagatagc 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 aggaaagttgcaaaatctttgaaaggatttgaaggagtggaggaggtgagtgcagatagc 332
Query: 193 aaggcaagcaaagtggtagtgagaggaaaggcagcagaccccataaaggtgcgtgagaga 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 aaggcaagcaaagtggtagtgagaggaaaggcagcagaccccataaaggtgcgtgagaga 392
Query: 253 cttgaaaagaaaagtggtaagaaagtagagctcatttcacctttgcctaaacctccggag 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 cttgaaaagaaaagtggtaagaaagtagagctcatttcacctttgcctaaacctccggag 452
Query: 313 gataaaaaagaagaaatcaaacaaccccagccagaggagaaaaaggaagaggcgcctcct 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 gataaaaaagaagaaatcaaacaaccccagccagaggagaaaaaggaagaggcgcctcct 512
Query: 373 ttggttacagtagtcctcaaagttcgaatgcattgtgaagcatgtgctctagctatacag 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ttggttacagtagtcctcaaagttcgaatgcattgtgaagcatgtgctctagctatacag 572
Query: 433 aaacgaatccgtaagattcaaggagtagaatcagtggaaacaaacttgggaaatgatcaa 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 aaacgaatccgtaagattcaaggagtagaatcagtggaaacaaacttgggaaatgatcaa 632
Query: 493 gtgacagtaaaaggtgcaattgacccatcaaagcttgctgatgag 537
|||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 633 gtgacagtaaaa-gtgcaattgacccatcaaagcttgctgatgag 676
>gnl|LJGI|TC69101 similar to UniRef100_A7QEU2 Cluster: Chromosome chr16 scaffold_86,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_86, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (84%)
Length = 1520
Score = 52.0 bits (26), Expect = 5e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 755 ttttcagtgatgagaatccaaatgcatgct 784
||||||||||||| ||||||||||||||||
Sbjct: 1200 ttttcagtgatgaaaatccaaatgcatgct 1229