Miyakogusa Predicted Gene
- Lj6g3v1707360.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1707360.2 Non Chatacterized Hit- tr|I1KNM6|I1KNM6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25586 PE,76.32,0,no
description,BTB/POZ fold; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; NPH3,NPH3; POZ domain,,CUFF.59817.2
(1815 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV777782 similar to UniRef100_A2Q315 Cluster: Root phot... 841 0.0
gnl|LJGI|FS331219 weakly similar to UniRef100_A7P4B3 Cluster: Ch... 329 4e-89
gnl|LJGI|TC75613 similar to UniRef100_A2Q315 Cluster: Root photo... 54 3e-06
>gnl|LJGI|AV777782 similar to UniRef100_A2Q315 Cluster: Root phototropism protein 3 ,
related; n=1; Medicago truncatula|Rep: Root phototropism
protein 3 , related - Medicago truncatula (Barrel medic),
partial (35%)
Length = 424
Score = 841 bits (424), Expect = 0.0
Identities = 424/424 (100%)
Strand = Plus / Plus
Query: 940 agcatacaatttgaggaggcaacagtgagtgacctgctttatccttcaacatctccattg 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcatacaatttgaggaggcaacagtgagtgacctgctttatccttcaacatctccattg 60
Query: 1000 gaccagaatttctatgatacggagttagttctagcagtgttggaaagctttgtgaagttt 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaccagaatttctatgatacggagttagttctagcagtgttggaaagctttgtgaagttt 120
Query: 1060 tggaaaagaatctcccctggtgctgtggataacaggcacttcttgagatcaatcagaaaa 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggaaaagaatctcccctggtgctgtggataacaggcacttcttgagatcaatcagaaaa 180
Query: 1120 gttggcaagctcattgattcctatcttcaagtggttgcaagggatgaaaacatgccagtg 1179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttggcaagctcattgattcctatcttcaagtggttgcaagggatgaaaacatgccagtg 240
Query: 1180 cagaagtttgtagctcttgctgaaactgtaccagctattggccgaatagagcatgatgat 1239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagaagtttgtagctcttgctgaaactgtaccagctattggccgaatagagcatgatgat 300
Query: 1240 ttgtaccgggcaattaacatctatcttaaggtgcatcctgatctgagcaaggtagacaag 1299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgtaccgggcaattaacatctatcttaaggtgcatcctgatctgagcaaggtagacaag 360
Query: 1300 aagtgcttgtgccggagtctagagtgccaaagactgtccccagaagtgtgtgctcatgca 1359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagtgcttgtgccggagtctagagtgccaaagactgtccccagaagtgtgtgctcatgca 420
Query: 1360 gtta 1363
||||
Sbjct: 421 gtta 424
>gnl|LJGI|FS331219 weakly similar to UniRef100_A7P4B3 Cluster: Chromosome chr1
scaffold_5, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_5, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (16%)
Length = 759
Score = 329 bits (166), Expect = 4e-89
Identities = 358/422 (84%)
Strand = Plus / Plus
Query: 1 atgaagttcatgaaacttggaacaaggccggatactttctacactgaacaagccaccagg 60
|||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||
Sbjct: 332 atgaagttcatgaaacttgggacaaggccagatactttctacactgaacaagctaccaga 391
Query: 61 agtatagtttcagatttacctgctgaccttgtgataagaatcaacgatactacttatctt 120
| | | |||||| || |||| |||||||||||| |||||| |||| || ||||||
Sbjct: 392 accctgatatcagatatagctgcagaccttgtgatacaaatcaatgatattaattatctg 451
Query: 121 ctacacaagtctccgcttcttaaaaaatgtggccttcttcaaagactttgctctggttct 180
|||||||||| | |||||||| |||||| ||||| | || || ||||||| || ||||
Sbjct: 452 ctacacaagtttgcgcttcttccaaaatgcggcctcttgcagaggctttgctatgattct 511
Query: 181 agtgattctgagagtgttcctcttgagcttaatgatatgcctggaggaccagaagctttt 240
||||||||||||||||| || | |||||| ||||||| ||||||||| ||| ||||||
Sbjct: 512 agtgattctgagagtgtatctgtagagcttcatgatatacctggaggagaagatgctttt 571
Query: 241 gaactctgtgctaagttctgctatggaatttctatcaacattagtgcacataactttgta 300
||||||||||||||||| |||||||||||||| ||||| || ||||| ||||||||||||
Sbjct: 572 gaactctgtgctaagttttgctatggaatttcaatcaaaatcagtgcccataactttgta 631
Query: 301 cccacactctgcgctgctaagctcctccaaatgaatgactccattgagaagggaaacttg 360
|| |||||| | ||||| ||| | || |||||| ||||||||||||| ||||||||||
Sbjct: 632 cctacactcagtgctgccaagtttcttagaatgaacgactccattgagaggggaaacttg 691
Query: 361 gtagggaaacttgagtctttcttcacttcatgtattcttgaaggttggaaggactctatt 420
||||| |||||||| || || |||| |||||| |||||||||||||||||||| || |||
Sbjct: 692 gtaggaaaacttgaatcatttttcaattcatgcattcttgaaggttggaaggattccatt 751
Query: 421 gc 422
||
Sbjct: 752 gc 753
>gnl|LJGI|TC75613 similar to UniRef100_A2Q315 Cluster: Root phototropism protein 3 ,
related; n=1; Medicago truncatula|Rep: Root phototropism
protein 3 , related - Medicago truncatula (Barrel medic),
partial (17%)
Length = 557
Score = 54.0 bits (27), Expect = 3e-06
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 1618 agattagatggtaacttggcattggacttggaaagaaagatggttataagaggaaacact 1677
||||||||| |||| ||| ||||||| | |||| |||||||||||| |||||| |||||
Sbjct: 415 agattagatagtaagttgccattggaactagaaaaaaagatggttatcagaggagacact 356
Query: 1678 gag 1680
|||
Sbjct: 355 gag 353