Miyakogusa Predicted Gene

Lj6g3v1692830.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1692830.1 Non Chatacterized Hit- tr|I1MFY3|I1MFY3_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,85.18,0,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; ZF_SWIM,Zinc finger, SWIM-type;
FAR1,FAR1 DNA bindi,NODE_33603_length_2522_cov_31.731958.path2.1
         (2046 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC82459                                                      212   6e-54

>gnl|LJGI|TC82459 
          Length = 320

 Score =  212 bits (107), Expect = 6e-54
 Identities = 158/167 (94%), Gaps = 6/167 (3%)
 Strand = Plus / Plus

                                                                        
Query: 1873 agttctgttagcgctgatgatactgaccctattca-atggtctaatcagttatttagtag 1931
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1    agttctgttagcgctgatgatactgaccctattcacatggtctaatcagttatttagtag 60

                                                                        
Query: 1932 tgcccta-caagttg-tcgaggaaggcacaatttctctggatcattacaatg-tagcgct 1988
            ||||||| || |||| |||||||||||||||| ||||||||||||||| ||| |||||||
Sbjct: 61   tgccctaccacgttgctcgaggaaggcacaatctctctggatcattaccatgctagcgct 120

                                                           
Query: 1989 gca-ggcctgtgaagaatcactgag-taaggttcatgatgtagacca 2033
            ||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 121  gcacggcctgtgaagaatcactgagctaaggttcatgatgtagacca 167