Miyakogusa Predicted Gene

Lj6g3v1692520.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1692520.1 tr|G7IFV9|G7IFV9_MEDTR Protein argonaute
OS=Medicago truncatula GN=MTR_2g028910 PE=4 SV=1,76.4,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; EUKARYOTIC TRANSLATION INITIATION FACTOR
2C,NULL; Ribonuclease H,CUFF.59795.1
         (2997 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74652                                                       82   2e-14
gnl|LJGI|BW598563 weakly similar to UniRef100_A7QM22 Cluster: Ch...    68   3e-10

>gnl|LJGI|TC74652 
          Length = 550

 Score = 81.8 bits (41), Expect = 2e-14
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                             
Query: 2831 tgtactatgctgatcttgctgcttatagaggacggctataccatgaagc 2879
            |||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 1    tgtactatgctgatcttgctgcttatagaggacgactatactatgaagc 49


>gnl|LJGI|BW598563 weakly similar to UniRef100_A7QM22 Cluster: Chromosome undetermined
            scaffold_123, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_123, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (8%)
          Length = 347

 Score = 67.9 bits (34), Expect = 3e-10
 Identities = 118/146 (80%)
 Strand = Plus / Plus

                                                                        
Query: 2017 aagtacctcaagtggatttctgagaccaaaattggtatagtgacacaatgctgcttgtcc 2076
            |||| ||||||||||||| ||||||||||  ||||  || |||||||||||||||| || 
Sbjct: 157  aagtgcctcaagtggattgctgagaccaaggttggcttaatgacacaatgctgcttatct 216

                                                                        
Query: 2077 agtagtgctaatgaaggcgaggataaattttatactaatttggctctcaagatcaatgcc 2136
             ||| ||||||||||||     |  ||| |   |||||| |||||||||| |||||||| 
Sbjct: 217  ggtaatgctaatgaaggatcataccaatatctcactaatctggctctcaaaatcaatgca 276

                                      
Query: 2137 aagcttggaggcagtaatgtggagct 2162
            ||  ||||||||| ||||||||||||
Sbjct: 277  aaaattggaggcactaatgtggagct 302