Miyakogusa Predicted Gene

Lj6g3v1692510.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1692510.1 Non Chatacterized Hit- tr|I1HK72|I1HK72_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,23.99,2e-18,seg,NULL,CUFF.59794.1
         (1257 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70903                                                      569   e-161

>gnl|LJGI|TC70903 
          Length = 580

 Score =  569 bits (287), Expect = e-161
 Identities = 293/295 (99%)
 Strand = Plus / Plus

                                                                        
Query: 963  atggatgagcagctacctcaacttagttgaagatagaaatttgccaccaatggctttctc 1022
            ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1    atggatgagcagctacctctacttagttgaagatagatatttgccaccaatggctttctc 60

                                                                        
Query: 1023 aatcttagcaccccagctgctacaatccttgaattatgataatgatgttgagaaaagagt 1082
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   aatcttagcaccccagctgctacaatccttgaattatgataatgatgttgagaaaagagt 120

                                                                        
Query: 1083 gctagcttcatattcattgctatgccttattaaaaattcaggatgtgtttctgtcctacc 1142
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gctagcttcatattcattgctatgccttattaaaaattcaggatgtgtttctgtcctacc 180

                                                                        
Query: 1143 atcattgaataaagattcactcagacatctcagaaatctctccctagtgacatggactgc 1202
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  atcattgaataaagattcactcagacatctcagaaatctctccctagtgacatggactgc 240

                                                                   
Query: 1203 caatgaactcatttcaattgtctcaaaaagcagcttggaattaagtcaatgatga 1257
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  caatgaactcatttcaattgtctcaaaaagcagcttggaattaagtcaatgatga 295