Miyakogusa Predicted Gene
- Lj6g3v1690570.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1690570.1 Non Chatacterized Hit- tr|B9RTM5|B9RTM5_RICCO
Pentatricopeptide repeat-containing protein, putative
,29.02,7e-19,seg,NULL; PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; SUBFAMILY NOT NAMED,NULL;
F,gene.g66515.t1.1
(844 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW604923 835 0.0
gnl|LJGI|BP035488 similar to UniRef100_A7P1S1 Cluster: Chromosom... 345 3e-94
>gnl|LJGI|BW604923
Length = 439
Score = 835 bits (421), Expect = 0.0
Identities = 427/429 (99%)
Strand = Plus / Plus
Query: 1 atggcttatcaccttggagcgagaaggaccacacggatattagaaaccctgttcccactg 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 11 atggcttatcaccttggagcgagaaggaccacacggatattagaaatcctgttcccactg 70
Query: 61 aacccaaatcccgtaaaatcaataccaccaccactgttcacgcggcgattcctccattcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 aacccaaatcccgtaaaatcaataccaccaccactgttcacgcggcgattcctccattcg 130
Query: 121 cagccggagcatgccgccggagccggagcgttcgtccagaacctgctcaagttccgaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 cagccggagcatgccgccggagccggagcgttcgtccagaacctgctcaagttccgaagg 190
Query: 181 gacaaacccacagaccaggtggagcgagctcttgacctctgcgggttcgacctcaacgac 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gacaaacccacagacctggtggagcgagctcttgacctctgcgggttcgacctcaacgac 250
Query: 241 gatctcgtcctcgacgtgcttcgacgacaccgttccgattggaaacccgccctcgtcttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gatctcgtcctcgacgtgcttcgacgacaccgttccgattggaaacccgccctcgtcttc 310
Query: 301 ttcaactgggcctccaaagcagatagctacgcacccacttcccgcgtttgcaacgagatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ttcaactgggcctccaaagcagatagctacgcacccacttcccgcgtttgcaacgagatt 370
Query: 361 ctcgacatcctcggcaagatgagccgcttcgaggaactgcaccaagtgttcgatgaaatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ctcgacatcctcggcaagatgagccgcttcgaggaactgcaccaagtgttcgatgaaatg 430
Query: 421 tcgcacaga 429
|||||||||
Sbjct: 431 tcgcacaga 439
>gnl|LJGI|BP035488 similar to UniRef100_A7P1S1 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (45%)
Length = 534
Score = 345 bits (174), Expect = 3e-94
Identities = 174/174 (100%)
Strand = Plus / Plus
Query: 590 acaagcatgtagaagatgcagaaacattgtttcacagcaaggcgcgcgagtttcagctcc 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acaagcatgtagaagatgcagaaacattgtttcacagcaaggcgcgcgagtttcagctcc 60
Query: 650 accgtgatatcaagacttggaacgtgattctcaatggttggtgtgttttggggaacgctc 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 accgtgatatcaagacttggaacgtgattctcaatggttggtgtgttttggggaacgctc 120
Query: 710 atgaggcgaagagggtttggaaggatatcatggcatccaaatgcagacctgatc 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgaggcgaagagggtttggaaggatatcatggcatccaaatgcagacctgatc 174
Score = 163 bits (82), Expect = 2e-39
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 763 ccaagaaagggaaactgggcaccgctcttaagctgtttcgcgggatgtggaatgagggtt 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ccaagaaagggaaactgggcaccgctcttaagctgtttcgcgggatgtggaatgagggtt 267
Query: 823 gcaattgcaaacccgatgttgt 844
||||||||||||||||||||||
Sbjct: 268 gcaattgcaaacccgatgttgt 289