Miyakogusa Predicted Gene
- Lj6g3v1690540.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1690540.1 CUFF.59765.1
(543 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60905 similar to UniRef100_Q6Q625 Cluster: Root hair ... 896 0.0
gnl|LJGI|FS331262 similar to UniRef100_A7QCR6 Cluster: Chromosom... 599 e-171
gnl|LJGI|TC61691 homologue to UniRef100_Q0JLS6 Cluster: Os01g057... 96 3e-19
>gnl|LJGI|TC60905 similar to UniRef100_Q6Q625 Cluster: Root hair defective 3
GTP-binding protein; n=1; Triticum aestivum|Rep: Root
hair defective 3 GTP-binding protein - Triticum aestivum
(Wheat), partial (27%)
Length = 839
Score = 896 bits (452), Expect = 0.0
Identities = 461/464 (99%)
Strand = Plus / Plus
Query: 1 atggcgagaatcgacgacgattgccacgccacgcagctcatcgacggcgacggcaccttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 atggcgagaatcgacgacgattgccacgccacgcagctcatcgacggcgacggcaccttc 213
Query: 61 aacgtcgccggcctcgacactttcatcaaaacctctagcctcgctgcttgcggcctctcc 120
||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 214 aacgtcgccggcctcgacactttcatcaaaacctccagcctcgccgcttgtggcctctcc 273
Query: 121 tacgccgtcgtcgccatcatgggtcctcaaagcagcgggaagagtacattgatgaatcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tacgccgtcgtcgccatcatgggtcctcaaagcagcgggaagagtacattgatgaatcat 333
Query: 181 cttttccacacaagtttcagggagatggatgctttcaggggaagatcgcaaacgactaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 cttttccacacaagtttcagggagatggatgctttcaggggaagatcgcaaacgactaag 393
Query: 241 ggcatttggatagccaagtgtgttggaattgagccttgcactgttgctatggatttagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ggcatttggatagccaagtgtgttggaattgagccttgcactgttgctatggatttagag 453
Query: 301 ggcactgatggaagggagaggggtgaggatgataccgcttttgagaaacagagcgctctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ggcactgatggaagggagaggggtgaggatgataccgcttttgagaaacagagcgctctt 513
Query: 361 tttgctttagcagtatcagatattgttctgataaacatgtggtgtcatgatattggtcga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tttgctttagcagtatcagatattgttctgataaacatgtggtgtcatgatattggtcga 573
Query: 421 gaacaagcagccaataagcctcttttaaaaacagtttttcaggt 464
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 gaacaagcagccaataagcctcttttaaaaacagtttttcaggt 617
>gnl|LJGI|FS331262 similar to UniRef100_A7QCR6 Cluster: Chromosome undetermined
scaffold_79, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_79, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (25%)
Length = 732
Score = 599 bits (302), Expect = e-171
Identities = 320/326 (98%), Gaps = 5/326 (1%)
Strand = Plus / Plus
Query: 139 atgggtcctcaaagcagcgggaagagtacattgatgaatcatcttttccacacaagtttc 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgggtcctcaaagcagcgggaagagtacattgatgaatcatcttttccacacaagtttc 60
Query: 199 agggagatggatgctttcaggggaagatcgcaaacgactaagggcatttggatagccaag 258
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 61 agggagatggatgctttcaggggaggatcgcaaacgactaagggcatttggatagccaag 120
Query: 259 tgtgttggaattgagccttgcactgttgctatggatttagagggcactgatggaagggag 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtgttggaattgagccttgcactgttgctatggatttagagggcactgatggaagggag 180
Query: 319 aggggtgaggatgataccgcttttgagaaacagagcgctctttttgctttagcagtatca 378
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agg-----ggatgataccgcttttgagaaacagagcgctctttttgctttagcagtatca 235
Query: 379 gatattgttctgataaacatgtggtgtcatgatattggtcgagaacaagcagccaataag 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 gatattgttctgataaacatgtggtgtcatgatattggtcgagaacaagcagccaataag 295
Query: 439 cctcttttaaaaacagtttttcaggt 464
||||||||||||||||||||||||||
Sbjct: 296 cctcttttaaaaacagtttttcaggt 321
>gnl|LJGI|TC61691 homologue to UniRef100_Q0JLS6 Cluster: Os01g0575000 protein; n=2;
Oryza sativa Japonica Group|Rep: Os01g0575000 protein -
Oryza sativa subsp. japonica (Rice), partial (34%)
Length = 947
Score = 95.6 bits (48), Expect = 3e-19
Identities = 144/176 (81%)
Strand = Plus / Plus
Query: 289 atggatttagagggcactgatggaagggagaggggtgaggatgataccgcttttgagaaa 348
|||||||| ||||| || |||||||| || | || ||||||||||| || ||||| ||
Sbjct: 386 atggatttggagggtacagatggaagagaacgtggagaggatgatactgcatttgaaaag 445
Query: 349 cagagcgctctttttgctttagcagtatcagatattgttctgataaacatgtggtgtcat 408
||||| ||||| |||||| | || || |||||||| || || |||||||||||||| |||
Sbjct: 446 cagagtgctctgtttgctcttgctgtctcagatatagtgctaataaacatgtggtgccat 505
Query: 409 gatattggtcgagaacaagcagccaataagcctcttttaaaaacagtttttcaggt 464
|| ||||| || || ||||| || |||||||| ||||| ||||| || ||||||||
Sbjct: 506 gacattggccgtgagcaagctgcaaataagccgcttttgaaaactgtctttcaggt 561