Miyakogusa Predicted Gene

Lj6g3v1689490.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1689490.1 Non Chatacterized Hit- tr|I3SN70|I3SN70_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2 SV,84.89,0,Subunit
III of photosystem I reaction centre, PsaF,Photosystem I PsaF,
reaction centre subunit III; ,CUFF.59784.1
         (680 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65670 homologue to UniRef100_Q9XQB4 Cluster: Photosys...  1108   0.0  
gnl|LJGI|TC69162 similar to UniRef100_A7QCS6 Cluster: Chromosome...   422   e-117

>gnl|LJGI|TC65670 homologue to UniRef100_Q9XQB4 Cluster: Photosystem I reaction
           center subunit III; n=1; Vigna radiata var. radiata|Rep:
           Photosystem I reaction center subunit III - Phaseolus
           aureus (Mung bean) (Vigna radiata), partial (86%)
          Length = 1062

 Score = 1108 bits (559), Expect = 0.0
 Identities = 559/559 (100%)
 Strand = Plus / Plus

                                                                       
Query: 122 aaaactctgacgtgtcatcacagctgaaggccttctccgccgcgttggccctctcctcag 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 aaaactctgacgtgtcatcacagctgaaggccttctccgccgcgttggccctctcctcag 247

                                                                       
Query: 182 tcctcctctccgctccactcccggccgtcgccgatatctcaggcctgacaccatgcaagg 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tcctcctctccgctccactcccggccgtcgccgatatctcaggcctgacaccatgcaagg 307

                                                                       
Query: 242 agtcaaagcagttcgccaagcgcgagaagcagtcaatcaagaagctggaatcctctctga 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 agtcaaagcagttcgccaagcgcgagaagcagtcaatcaagaagctggaatcctctctga 367

                                                                       
Query: 302 agctctacgctccagacagcgcgccggcgctggcgatcaaggcttcagtggagaagacga 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 agctctacgctccagacagcgcgccggcgctggcgatcaaggcttcagtggagaagacga 427

                                                                       
Query: 362 agaggaggttcgacaactacgccaagcagggtcttctctgcggagcagatgggttgccgc 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 agaggaggttcgacaactacgccaagcagggtcttctctgcggagcagatgggttgccgc 487

                                                                       
Query: 422 atttgattgtgagtggtgaccagaggcactggggtgagttcatcactcccggggttttgt 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 atttgattgtgagtggtgaccagaggcactggggtgagttcatcactcccggggttttgt 547

                                                                       
Query: 482 tcctgtacatcgccggttggatcgggtgggttggtcggagctacttgattgcgatccgtg 541
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tcctgtacatcgccggttggatcgggtgggttggtcggagctacttgattgcgatccgtg 607

                                                                       
Query: 542 atgagaagaaaccgacccagaaggagattatcatcgatgttccacttgcttccagtttgg 601
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 atgagaagaaaccgacccagaaggagattatcatcgatgttccacttgcttccagtttgg 667

                                                                       
Query: 602 tgtttagaggattcagctggcctattgctgcttacagagagttcttgaatggtgaacttg 661
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 tgtttagaggattcagctggcctattgctgcttacagagagttcttgaatggtgaacttg 727

                              
Query: 662 ttgctaaggatgtctgaat 680
           |||||||||||||||||||
Sbjct: 728 ttgctaaggatgtctgaat 746


>gnl|LJGI|TC69162 similar to UniRef100_A7QCS6 Cluster: Chromosome undetermined
           scaffold_79, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_79, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (31%)
          Length = 557

 Score =  422 bits (213), Expect = e-117
 Identities = 213/213 (100%)
 Strand = Plus / Plus

                                                                       
Query: 468 tcccggggttttgttcctgtacatcgccggttggatcgggtgggttggtcggagctactt 527
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tcccggggttttgttcctgtacatcgccggttggatcgggtgggttggtcggagctactt 60

                                                                       
Query: 528 gattgcgatccgtgatgagaagaaaccgacccagaaggagattatcatcgatgttccact 587
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gattgcgatccgtgatgagaagaaaccgacccagaaggagattatcatcgatgttccact 120

                                                                       
Query: 588 tgcttccagtttggtgtttagaggattcagctggcctattgctgcttacagagagttctt 647
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgcttccagtttggtgtttagaggattcagctggcctattgctgcttacagagagttctt 180

                                            
Query: 648 gaatggtgaacttgttgctaaggatgtctgaat 680
           |||||||||||||||||||||||||||||||||
Sbjct: 181 gaatggtgaacttgttgctaaggatgtctgaat 213