Miyakogusa Predicted Gene

Lj6g3v1676440.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1676440.1 Non Chatacterized Hit- tr|A5BBY4|A5BBY4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,44.55,5e-17,GLTP,Glycolipid transfer protein domain; no
description,Glycolipid transfer protein domain; GLYCOLIP,CUFF.59753.1
         (621 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81761 similar to UniRef100_A7Q1D3 Cluster: Chromosome...   724   0.0  
gnl|LJGI|BP075787                                                     184   4e-46

>gnl|LJGI|TC81761 similar to UniRef100_A7Q1D3 Cluster: Chromosome chr10 scaffold_43,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr10 scaffold_43, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (43%)
          Length = 576

 Score =  724 bits (365), Expect = 0.0
 Identities = 368/369 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcggatagcaacggcgacaaaacactgcgtctaatcgccggcgcattcaaggacctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 atggcggatagcaacggcgacaaaacactgcgtctaatcgccggcgcattcaaggacctc 169

                                                                       
Query: 61  gccagcgcagtcgccgattcgcagaaggcagaggtggaggttgctcccttctcgcaggca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 gccagcgcagtcgccgattcgcagaaggcagaggtggaggttgctcccttctcgcaggca 229

                                                                       
Query: 121 tgctctctcgtctcccctctcttcggatgcttaggtgtcgccttcaaattcgctgaaagg 180
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 230 tgctctctcgtctcccctctcttcggatgcttaggtgtggccttcaaattcgctgaaagg 289

                                                                       
Query: 181 gattatgttgccaaggttgtagatttatcagaggcatcgaagtccattccgactttacat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gattatgttgccaaggttgtagatttatcagaggcatcgaagtccattccgactttacat 349

                                                                       
Query: 241 tctttgattgatcgggatgtacaagctgattctgtcaggactgcgggcagccataccaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tctttgattgatcgggatgtacaagctgattctgtcaggactgcgggcagccataccaga 409

                                                                       
Query: 301 aatctgttgagagtaaagcgtggacttgacatggtcagagtactctttgaacaaatgcta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 aatctgttgagagtaaagcgtggacttgacatggtcagagtactctttgaacaaatgcta 469

                    
Query: 361 gtcactgag 369
           |||||||||
Sbjct: 470 gtcactgag 478


>gnl|LJGI|BP075787 
          Length = 504

 Score =  184 bits (93), Expect = 4e-46
 Identities = 106/109 (97%), Gaps = 1/109 (0%)
 Strand = Plus / Minus

                                                                       
Query: 514 gaggcgtcagcaaaagatcaaatgcaaatatatgtctcgtcatcggcatctctaatccaa 573
           ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 268 gaggcgtcagccaaagatcaaatgcaaatatatatctcgtcatcggcatctctaatccaa 209

                                                            
Query: 574 tatattgacaaactctttgtttccagaga-cttgggaatagattggtga 621
           ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 208 tatattgacaaactctttgtttccagagaccttgggaatagattggtga 160