Miyakogusa Predicted Gene
- Lj6g3v1654310.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1654310.1 Non Chatacterized Hit- tr|I1MG30|I1MG30_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,92.78,0,seg,NULL;
Homeodomain,Homeodomain; in StAR and phosphatidylcholine transfer
pro,Lipid-binding START;,CUFF.59749.1
(1464 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV781096 homologue to UniRef100_A7NZJ8 Cluster: Chromos... 115 8e-25
gnl|LJGI|BP056674 similar to UniRef100_Q5D1M5 Cluster: Class III... 74 3e-12
gnl|LJGI|TC70081 homologue to UniRef100_A8E664 Cluster: Class II... 64 3e-09
>gnl|LJGI|AV781096 homologue to UniRef100_A7NZJ8 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 497
Score = 115 bits (58), Expect = 8e-25
Identities = 106/122 (86%)
Strand = Plus / Plus
Query: 52 tatgtgaggtacactcctgaacaagttgaagctttggagagggtctatgctgaatgtcca 111
||||||||||||||| ||||||||||||| ||| |||| ||||| |||||||| || ||
Sbjct: 366 tatgtgaggtacactgctgaacaagttgaggctctggaaagggtttatgctgagtgcccc 425
Query: 112 aagccgagttctttaaggaggcaacaacttatcagagagtgtcctatcctctccaacatt 171
||||| ||||| | ||||| || ||||||||||||||||||||||| || |||||||||
Sbjct: 426 aagcctagttccctcaggagacagcaacttatcagagagtgtcctattctttccaacatt 485
Query: 172 ga 173
||
Sbjct: 486 ga 487
>gnl|LJGI|BP056674 similar to UniRef100_Q5D1M5 Cluster: Class III HD-Zip protein 2;
n=1; Populus trichocarpa|Rep: Class III HD-Zip protein 2
- Populus trichocarpa (Western balsam poplar) (Populus
balsamiferasubsp. trichocarpa), partial (18%)
Length = 553
Score = 73.8 bits (37), Expect = 3e-12
Identities = 121/149 (81%)
Strand = Plus / Plus
Query: 79 gaagctttggagagggtctatgctgaatgtccaaagccgagttctttaaggaggcaacaa 138
||||||||||| |||| ||| |||| ||||||||||| |||||||| |||||||| ||
Sbjct: 135 gaagctttggaacgggtttatactgagtgtccaaagcctagttctttgaggaggcagcag 194
Query: 139 cttatcagagagtgtcctatcctctccaacattgaaccaaaacagatcaaagtttggttc 198
|| ||| | || || || | ||| | || ||||||| || |||||||||||||||||
Sbjct: 195 ctgatccgtgaatgcccggttctcgcgaatgttgaaccgaagcagatcaaagtttggttt 254
Query: 199 caaaatcgcagatgtcgtgagaagcagag 227
|| |||||||| ||| | |||||||||||
Sbjct: 255 cagaatcgcaggtgtagagagaagcagag 283
>gnl|LJGI|TC70081 homologue to UniRef100_A8E664 Cluster: Class III HD-Zip protein
CNA2; n=1; Medicago truncatula|Rep: Class III HD-Zip
protein CNA2 - Medicago truncatula (Barrel medic),
partial (20%)
Length = 652
Score = 63.9 bits (32), Expect = 3e-09
Identities = 119/148 (80%)
Strand = Plus / Plus
Query: 155 ctatcctctccaacattgaaccaaaacagatcaaagtttggttccaaaatcgcagatgtc 214
|||| |||||||||||||| || | |||||||||||||||||||| || | ||||||
Sbjct: 495 ctattctctccaacattgagcctaggcagatcaaagtttggttccagaacagaagatgta 554
Query: 215 gtgagaagcagaggaaggaagcttcacgtttgaccacagtgaataggaagctgagtgcta 274
| ||||||||||| || |||| || ||| || | || ||||||||| ||| ||| |
Sbjct: 555 gagagaagcagagaaaagaaggttttcgtctgcaagctgttaataggaagttgactgcca 614
Query: 275 tgaacaagctgctaatggaagagaatga 302
||||||||||||| ||||| || |||||
Sbjct: 615 tgaacaagctgctgatggatgaaaatga 642