Miyakogusa Predicted Gene

Lj6g3v1653280.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1653280.2 Non Chatacterized Hit- tr|I3SY35|I3SY35_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,95.35,6e-16,
,CUFF.59742.2
         (141 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65911 homologue to UniRef100_A7Q6S1 Cluster: Chromoso...   280   2e-75
gnl|LJGI|TC80685 similar to UniRef100_A7Q6S1 Cluster: Chromosome...   198   6e-51
gnl|LJGI|TC57231 similar to UniRef100_Q41369 Cluster: COP9; n=1;...   198   6e-51

>gnl|LJGI|TC65911 homologue to UniRef100_A7Q6S1 Cluster: Chromosome chr12
           scaffold_57, whole genome shotgun sequence; n=2; Vitis
           vinifera|Rep: Chromosome chr12 scaffold_57, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (55%)
          Length = 611

 Score =  280 bits (141), Expect = 2e-75
 Identities = 141/141 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcttcagcaaggttggactgcggactctgtgtccaggatgcttactgtgaagaagcaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 atgcttcagcaaggttggactgcggactctgtgtccaggatgcttactgtgaagaagcaa 255

                                                                       
Query: 61  cctgttgtgacagagcagaaactagatcctagtaaattgcagcgattgactgaatacgtc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 cctgttgtgacagagcagaaactagatcctagtaaattgcagcgattgactgaatacgtc 315

                                
Query: 121 ttccatcttgagcattgacac 141
           |||||||||||||||||||||
Sbjct: 316 ttccatcttgagcattgacac 336


>gnl|LJGI|TC80685 similar to UniRef100_A7Q6S1 Cluster: Chromosome chr12 scaffold_57,
           whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_57, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (78%)
          Length = 480

 Score =  198 bits (100), Expect = 6e-51
 Identities = 124/132 (93%)
 Strand = Plus / Plus

                                                                       
Query: 7   cagcaaggttggactgcggactctgtgtccaggatgcttactgtgaagaagcaacctgtt 66
           |||||||||||||||| |||||||| |||| |||||||||| ||||||||||||||||| 
Sbjct: 52  cagcaaggttggactgtggactctgcgtcccggatgcttacggtgaagaagcaacctgtc 111

                                                                       
Query: 67  gtgacagagcagaaactagatcctagtaaattgcagcgattgactgaatacgtcttccat 126
           |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 112 gtgacagagcagaaactagatcctagtaaattgcagcgattgacagaatatgtcttccat 171

                       
Query: 127 cttgagcattga 138
           || |||||||||
Sbjct: 172 ctcgagcattga 183


>gnl|LJGI|TC57231 similar to UniRef100_Q41369 Cluster: COP9; n=1; Spinacia
           oleracea|Rep: COP9 - Spinacia oleracea (Spinach),
           partial (97%)
          Length = 917

 Score =  198 bits (100), Expect = 6e-51
 Identities = 124/132 (93%)
 Strand = Plus / Plus

                                                                       
Query: 7   cagcaaggttggactgcggactctgtgtccaggatgcttactgtgaagaagcaacctgtt 66
           |||||||||||||||| |||||||| |||| |||||||||| ||||||||||||||||| 
Sbjct: 559 cagcaaggttggactgtggactctgcgtcccggatgcttacggtgaagaagcaacctgtc 618

                                                                       
Query: 67  gtgacagagcagaaactagatcctagtaaattgcagcgattgactgaatacgtcttccat 126
           |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 619 gtgacagagcagaaactagatcctagtaaattgcagcgattgacagaatatgtcttccat 678

                       
Query: 127 cttgagcattga 138
           || |||||||||
Sbjct: 679 ctcgagcattga 690