Miyakogusa Predicted Gene
- Lj6g3v1643270.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1643270.1 CUFF.59769.1
(1140 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60743 similar to UniRef100_Q41014 Cluster: Ferredoxin... 2252 0.0
gnl|LJGI|TC76777 similar to UniRef100_Q41014 Cluster: Ferredoxin... 1193 0.0
gnl|LJGI|TC72671 homologue to UniRef100_Q41014 Cluster: Ferredox... 965 0.0
gnl|LJGI|GO012258 similar to UniRef100_Q41014 Cluster: Ferredoxi... 759 0.0
gnl|LJGI|BP062615 similar to UniRef100_Q41014 Cluster: Ferredoxi... 509 e-143
gnl|LJGI|TC78783 similar to UniRef100_Q41014 Cluster: Ferredoxin... 232 4e-60
>gnl|LJGI|TC60743 similar to UniRef100_Q41014 Cluster: Ferredoxin--NADP reductase, root
isozyme, chloroplast precursor; n=1; Pisum sativum|Rep:
Ferredoxin--NADP reductase, root isozyme, chloroplast
precursor - Pisum sativum (Garden pea), partial (96%)
Length = 1501
Score = 2252 bits (1136), Expect = 0.0
Identities = 1139/1140 (99%)
Strand = Plus / Plus
Query: 1 atggctcacttggcggtatcacagatggctgtgactgttcctgttggcagtgatttgtct 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 61 atggctcacttggcggtatcacagatggctgtaactgttcctgttggcagtgatttgtct 120
Query: 61 atccgaagatcagggtttaaggcatctagcttcagctttcaggataaatcatgggcaccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atccgaagatcagggtttaaggcatctagcttcagctttcaggataaatcatgggcaccg 180
Query: 121 gcatttactttggacttgaaagcaaacagctcctttgtaagaagtcgtcaggtgatatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcatttactttggacttgaaagcaaacagctcctttgtaagaagtcgtcaggtgatatgc 240
Query: 181 ctgtcagtgccagtgcaacaagcgactgggcccaaagttactgtctccccattagaattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctgtcagtgccagtgcaacaagcgactgggcccaaagttactgtctccccattagaattg 300
Query: 241 gaagaagctcccgagcctcccttgaacttacacaagcctaaacaaccttatacagcaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaagaagctcccgagcctcccttgaacttacacaagcctaaacaaccttatacagcaaca 360
Query: 301 attgtttctgttgagagaatagtgggaccaaaggctccaggggaaacttgtcatattgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 attgtttctgttgagagaatagtgggaccaaaggctccaggggaaacttgtcatattgtg 420
Query: 361 attgatcatgatggaaatgttccctactgggaaggacagagttatggtgttattccacca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 attgatcatgatggaaatgttccctactgggaaggacagagttatggtgttattccacca 480
Query: 421 ggtgaaaatccgaagaaacctgggagtccccataatgttcgactctattcaattgcctcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggtgaaaatccgaagaaacctgggagtccccataatgttcgactctattcaattgcctcc 540
Query: 481 acaagatatggagattcttttgatggcaaaacagctagcttgtgtgtgcgtcgagctgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acaagatatggagattcttttgatggcaaaacagctagcttgtgtgtgcgtcgagctgtt 600
Query: 541 tattatgatcctgatacaggaaaggaagatccctctaagaatggtgtttgtagcaacttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tattatgatcctgatacaggaaaggaagatccctctaagaatggtgtttgtagcaacttc 660
Query: 601 ttgtgtaactcaaagcctggagacaaagttcaggtaacaggcccttcagggaaggtaatg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttgtgtaactcaaagcctggagacaaagttcaggtaacaggcccttcagggaaggtaatg 720
Query: 661 cttttgcctgaggatgacccaaatgctacccatataatgattgggaccggcactggtgtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cttttgcctgaggatgacccaaatgctacccatataatgattgggaccggcactggtgtt 780
Query: 721 gctccatttagaggctatcttcgtcgaatgttcatggaatctgtccctacattcaagttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gctccatttagaggctatcttcgtcgaatgttcatggaatctgtccctacattcaagttt 840
Query: 781 ggcggactagcatggcttttcctcggtgttgccaacactgatagtcttctctatcatgat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ggcggactagcatggcttttcctcggtgttgccaacactgatagtcttctctatcatgat 900
Query: 841 gaatttaccaaatacctcaaggattacccaaccaacttccgctacgatatagcccttagc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gaatttaccaaatacctcaaggattacccaaccaacttccgctacgatatagcccttagc 960
Query: 901 agagagcagaagaacaagaatggtggcaaaatgtatgttcaggataagattgaggagtac 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 agagagcagaagaacaagaatggtggcaaaatgtatgttcaggataagattgaggagtac 1020
Query: 961 agtgatgaaatcttcaagctcctggataacggggcccacatttatttctgtggtctgaga 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 agtgatgaaatcttcaagctcctggataacggggcccacatttatttctgtggtctgaga 1080
Query: 1021 gggatgatgcctgggattcaagaaacactgaaaagggttgctgatcagagaggagaaaat 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gggatgatgcctgggattcaagaaacactgaaaagggttgctgatcagagaggagaaaat 1140
Query: 1081 tgggatgagaagctctcacaacttaagaagaacaagcaatggcatgtggaagtttactga 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 tgggatgagaagctctcacaacttaagaagaacaagcaatggcatgtggaagtttactga 1200
>gnl|LJGI|TC76777 similar to UniRef100_Q41014 Cluster: Ferredoxin--NADP reductase,
root isozyme, chloroplast precursor; n=1; Pisum
sativum|Rep: Ferredoxin--NADP reductase, root isozyme,
chloroplast precursor - Pisum sativum (Garden pea),
partial (49%)
Length = 774
Score = 1193 bits (602), Expect = 0.0
Identities = 605/606 (99%)
Strand = Plus / Plus
Query: 1 atggctcacttggcggtatcacagatggctgtgactgttcctgttggcagtgatttgtct 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 169 atggctcacttggcggtatcacagatggctgtaactgttcctgttggcagtgatttgtct 228
Query: 61 atccgaagatcagggtttaaggcatctagcttcagctttcaggataaatcatgggcaccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 atccgaagatcagggtttaaggcatctagcttcagctttcaggataaatcatgggcaccg 288
Query: 121 gcatttactttggacttgaaagcaaacagctcctttgtaagaagtcgtcaggtgatatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gcatttactttggacttgaaagcaaacagctcctttgtaagaagtcgtcaggtgatatgc 348
Query: 181 ctgtcagtgccagtgcaacaagcgactgggcccaaagttactgtctccccattagaattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ctgtcagtgccagtgcaacaagcgactgggcccaaagttactgtctccccattagaattg 408
Query: 241 gaagaagctcccgagcctcccttgaacttacacaagcctaaacaaccttatacagcaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gaagaagctcccgagcctcccttgaacttacacaagcctaaacaaccttatacagcaaca 468
Query: 301 attgtttctgttgagagaatagtgggaccaaaggctccaggggaaacttgtcatattgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 attgtttctgttgagagaatagtgggaccaaaggctccaggggaaacttgtcatattgtg 528
Query: 361 attgatcatgatggaaatgttccctactgggaaggacagagttatggtgttattccacca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 attgatcatgatggaaatgttccctactgggaaggacagagttatggtgttattccacca 588
Query: 421 ggtgaaaatccgaagaaacctgggagtccccataatgttcgactctattcaattgcctcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 ggtgaaaatccgaagaaacctgggagtccccataatgttcgactctattcaattgcctcc 648
Query: 481 acaagatatggagattcttttgatggcaaaacagctagcttgtgtgtgcgtcgagctgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 acaagatatggagattcttttgatggcaaaacagctagcttgtgtgtgcgtcgagctgtt 708
Query: 541 tattatgatcctgatacaggaaaggaagatccctctaagaatggtgtttgtagcaacttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 tattatgatcctgatacaggaaaggaagatccctctaagaatggtgtttgtagcaacttc 768
Query: 601 ttgtgt 606
||||||
Sbjct: 769 ttgtgt 774
>gnl|LJGI|TC72671 homologue to UniRef100_Q41014 Cluster: Ferredoxin--NADP reductase,
root isozyme, chloroplast precursor; n=1; Pisum
sativum|Rep: Ferredoxin--NADP reductase, root isozyme,
chloroplast precursor - Pisum sativum (Garden pea),
partial (44%)
Length = 1428
Score = 965 bits (487), Expect = 0.0
Identities = 500/503 (99%), Gaps = 1/503 (0%)
Strand = Plus / Plus
Query: 638 caggcccttcagggaaggtaatgcttttgcctgaggatgacccaaatgctacccatataa 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 caggcccttcagggaaggtaatgcttttgcctgaggatgacccaaatgctacccatataa 571
Query: 698 tgattgggaccggcactggtgttgctccatttagaggctatcttcgtcgaatgttcatgg 757
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 tgattgggaccggcactggcgttgctccatttagaggctatcttcgtcgaatgttcatgg 631
Query: 758 aatctgtccctacattcaagtttggcggactagcatggcttttcctcggtgttgccaaca 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 aatctgtccctacattcaagtttggcggactagcatggcttttcctcggtgttgccaaca 691
Query: 818 ctgatagtcttctctatcatgatgaatttaccaaatacctcaaggattacccaaccaact 877
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 ctgatag-cttctctatcatgatgaatttaccaaatacctcaaggattacccaaccaact 750
Query: 878 tccgctacgatatagcccttagcagagagcagaagaacaagaatggtggcaaaatgtatg 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 tccgctacgatatagcccttagcagagagcagaagaacaagaatggtggcaaaatgtatg 810
Query: 938 ttcaggataagattgaggagtacagtgatgaaatcttcaagctcctggataacggggccc 997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 ttcaggataagattgaggagtacagtgatgaaatcttcaagctcctggataacggggccc 870
Query: 998 acatttatttctgtggtctgagagggatgatgcctgggattcaagaaacactgaaaaggg 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 acatttatttctgtggtctgagagggatgatgcctgggattcaagaaacactgaaaaggg 930
Query: 1058 ttgctgatcagagaggagaaaattgggatgagaagctctcacaacttaagaagaacaagc 1117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931 ttgctgatcagagaggagaaaattgggatgagaagctctcacaacttaagaagaacaagc 990
Query: 1118 aatggcatgtggaagtttactga 1140
||||||||||||||||||||||
Sbjct: 991 catggcatgtggaagtttactga 1013
>gnl|LJGI|GO012258 similar to UniRef100_Q41014 Cluster: Ferredoxin--NADP reductase,
root isozyme, chloroplast precursor; n=1; Pisum
sativum|Rep: Ferredoxin--NADP reductase, root isozyme,
chloroplast precursor - Pisum sativum (Garden pea),
partial (56%)
Length = 732
Score = 759 bits (383), Expect = 0.0
Identities = 386/387 (99%)
Strand = Plus / Plus
Query: 1 atggctcacttggcggtatcacagatggctgtgactgttcctgttggcagtgatttgtct 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 51 atggctcacttggcggtatcacagatggctgtaactgttcctgttggcagtgatttgtct 110
Query: 61 atccgaagatcagggtttaaggcatctagcttcagctttcaggataaatcatgggcaccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 atccgaagatcagggtttaaggcatctagcttcagctttcaggataaatcatgggcaccg 170
Query: 121 gcatttactttggacttgaaagcaaacagctcctttgtaagaagtcgtcaggtgatatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 gcatttactttggacttgaaagcaaacagctcctttgtaagaagtcgtcaggtgatatgc 230
Query: 181 ctgtcagtgccagtgcaacaagcgactgggcccaaagttactgtctccccattagaattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 ctgtcagtgccagtgcaacaagcgactgggcccaaagttactgtctccccattagaattg 290
Query: 241 gaagaagctcccgagcctcccttgaacttacacaagcctaaacaaccttatacagcaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 gaagaagctcccgagcctcccttgaacttacacaagcctaaacaaccttatacagcaaca 350
Query: 301 attgtttctgttgagagaatagtgggaccaaaggctccaggggaaacttgtcatattgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 attgtttctgttgagagaatagtgggaccaaaggctccaggggaaacttgtcatattgtg 410
Query: 361 attgatcatgatggaaatgttccctac 387
|||||||||||||||||||||||||||
Sbjct: 411 attgatcatgatggaaatgttccctac 437
Score = 557 bits (281), Expect = e-158
Identities = 302/305 (99%), Gaps = 3/305 (0%)
Strand = Plus / Plus
Query: 764 tccctacattcaagtttggcggactagcatggcttttcctcggtgttgccaacactgata 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tccctacattcaagtttggcggactagcatggcttttcctcggtgttgccaacactgata 490
Query: 824 gtcttctctatcatgatgaatttaccaaatacctcaaggattacccaaccaacttccgct 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gtcttctctatcatgatgaatttaccaaatacctcaaggattacccaaccaacttccgct 550
Query: 884 acgatatagcccttagcagagagcagaagaacaagaatggtggcaaaatgtatgttcagg 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 acgatatagcccttagcagagagcagaagaacaagaatggtggcaaaatgtatgttcagg 610
Query: 944 ataagattgaggagtacagtgatgaaatcttcaagctcctggataacggggcccacattt 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ataagattgaggagtacagtgatgaaatcttcaagctcctggataacggggcccacattt 670
Query: 1004 atttctgtggtctgagagggatgatgcctgggattcaagaaacactgaaaagggttgctg 1063
||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||
Sbjct: 671 atttctgtggtctgagagggatgatgcctggga-tcaag-aacactgaaaaggg-tgctg 727
Query: 1064 atcag 1068
|||||
Sbjct: 728 atcag 732
>gnl|LJGI|BP062615 similar to UniRef100_Q41014 Cluster: Ferredoxin--NADP reductase,
root isozyme, chloroplast precursor; n=1; Pisum
sativum|Rep: Ferredoxin--NADP reductase, root isozyme,
chloroplast precursor - Pisum sativum (Garden pea),
partial (35%)
Length = 496
Score = 509 bits (257), Expect = e-143
Identities = 382/426 (89%), Gaps = 17/426 (3%)
Strand = Plus / Minus
Query: 222 tgtctccccattagaattggaagaagctcccgagcctcccttgaacttacacaagcctaa 281
||||||||||||||||||||||| ||| | |||||||| |||||||| |||||||||||
Sbjct: 492 tgtctccccattagaattggaagctgcttcagagcctccattgaacttgcacaagcctaa 433
Query: 282 acaaccttatacagcaacaattgtttctgttgagagaatagtgggaccaaaggctccagg 341
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 acaaccatataca---acaattgtttctgttgagagaatagtgggaccaaaggctccagg 376
Query: 342 ggaaacttgtcatattgtgattgatcatgatggaaatgttccctactgggaaggacagag 401
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 375 ggaaacttgtcatattgtgattgatcatggtggaaatgttccctactgggaaggacagag 316
Query: 402 ttatggtgttattccaccaggtgaaaatccgaagaaacctgggagtccccataatgttc- 460
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 315 ctatggttttattccaccaggtgaaaatccgaagaaacctgggagtccctataatgttcg 256
Query: 461 -------------gactctattcaattgcctccacaagatatggagattcttttgatggc 507
|||| ||||| ||||| |||||||||||| |||||||||||||||||
Sbjct: 255 actatattctattgactatattctattgcatccacaagatatagagattcttttgatggc 196
Query: 508 aaaacagctagcttgtgtgtgcgtcgagctgtttattatgatcctgatacaggaaaggaa 567
|||| ||| |||||||||||| |||| ||||||||||| |||||||| ||| || |||||
Sbjct: 195 aaaatagccagcttgtgtgtgtgtcgtgctgtttattacgatcctgagacatgataggaa 136
Query: 568 gatccctctaagaatggtgtttgtagcaacttcttgtgtaactcaaagcctggagacaaa 627
||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 135 gatccttctaagaatggcgtttgtagcaacttcttgtgtaactccaagcctggagactaa 76
Query: 628 gttcag 633
||||||
Sbjct: 75 gttcag 70
>gnl|LJGI|TC78783 similar to UniRef100_Q41014 Cluster: Ferredoxin--NADP reductase,
root isozyme, chloroplast precursor; n=1; Pisum
sativum|Rep: Ferredoxin--NADP reductase, root isozyme,
chloroplast precursor - Pisum sativum (Garden pea),
partial (24%)
Length = 737
Score = 232 bits (117), Expect = 4e-60
Identities = 233/267 (87%), Gaps = 6/267 (2%)
Strand = Plus / Plus
Query: 156 tgtaagaagtcgtcaggtgatatgcctgtcagtgccagtgcaacaagcgactgggcccaa 215
||||||||||| ||||||||||||| |||||||||| |||| || ||||| || ||| |
Sbjct: 2 tgtaagaagtcctcaggtgatatgcatgtcagtgcccgtgccaccagcgagtgtacccca 61
Query: 216 agtt-actgtctccccattagaattggaagaagctcccgagcctcccttgaacttacaca 274
|| | | ||||||||| || | |||||||| ||| | ||||||||||||||||| |||
Sbjct: 62 agctgattgtctcccccttcgcattggaaggtgcttcagagcctcccttgaacttgcacc 121
Query: 275 agcc-taaacaaccttatacagcaacaattgtttctgttgagagaatagtgggaccaaag 333
|||| ||||| ||| ||||| || ||||||||||||||||||||||||||||| |||
Sbjct: 122 agccctaaaccaccatatacc---accattgtttctgttgagagaatagtgggacccaag 178
Query: 334 gc-tccaggggaaacttgtcatattgtgattgatcatgatggaaatgttccctactggga 392
|| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 179 gcctccaggggaaacttgtcatattgtgattgatcatggtggaaatgttccctactggga 238
Query: 393 aggacagagttatggtgttattccacc 419
||||||||| |||||| ||||||||||
Sbjct: 239 aggacagagctatggttttattccacc 265
Score = 85.7 bits (43), Expect = 6e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 421 ggtgaaaatccgaagaaacctgggagtccccataatgttcgactctattcaattg 475
|||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||
Sbjct: 648 ggtgaaaatccgaagaaacctgggagtccctataatgttcgactatattctattg 702