Miyakogusa Predicted Gene

Lj6g3v1642220.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1642220.1 CUFF.59738.1
         (1140 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76529 similar to UniRef100_Q6AFL8 Cluster: Integral m...   400   e-111

>gnl|LJGI|TC76529 similar to UniRef100_Q6AFL8 Cluster: Integral membrane protein; n=1;
            Leifsonia xyli subsp. xyli|Rep: Integral membrane protein
            - Leifsonia xyli subsp. xyli, partial (6%)
          Length = 623

 Score =  400 bits (202), Expect = e-111
 Identities = 205/206 (99%)
 Strand = Plus / Plus

                                                                        
Query: 935  actctaattcaattgaagagtttcatctaactagcttgaatctccagcaacactgtatgg 994
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1    actctaattcaattgaagagtttcatctaactagcttgaatctccagccacactgtatgg 60

                                                                        
Query: 995  aaaataatttaagcaggttcaagataccgaggatgtttattgaatggacgaagccttttc 1054
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   aaaataatttaagcaggttcaagataccgaggatgtttattgaatggacgaagccttttc 120

                                                                        
Query: 1055 cacttactaccacgggaaaaataagaagagaccaattacaaaaggaagttttgtctcagc 1114
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  cacttactaccacgggaaaaataagaagagaccaattacaaaaggaagttttgtctcagc 180

                                      
Query: 1115 tacaatctttgcacagtaacctttga 1140
            ||||||||||||||||||||||||||
Sbjct: 181  tacaatctttgcacagtaacctttga 206