Miyakogusa Predicted Gene
- Lj6g3v1640140.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1640140.1 Non Chatacterized Hit- tr|F6HRT7|F6HRT7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,28.62,0.000000000007,OS09G0311600 PROTEIN,NULL; LEUCINE-RICH
REPEAT-CONTAINING PROTEIN,NULL; LRR_7,NULL;
LRR_1,Leucine-ri,CUFF.59728.1
(1026 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW622909 weakly similar to UniRef100_Q2YE87 Cluster: NB... 363 1e-99
gnl|LJGI|TC80664 weakly similar to UniRef100_Q2YE88 Cluster: NBS... 143 2e-33
gnl|LJGI|BP066885 weakly similar to UniRef100_A2Q526 Cluster: Le... 92 8e-18
gnl|LJGI|BW595042 weakly similar to UniRef100_A2Q529 Cluster: Le... 54 2e-06
>gnl|LJGI|BW622909 weakly similar to UniRef100_Q2YE87 Cluster: NBS-LRR type disease
resistance protein Rps1-k-2; n=1; Glycine max|Rep:
NBS-LRR type disease resistance protein Rps1-k-2 -
Glycine max (Soybean), partial (12%)
Length = 476
Score = 363 bits (183), Expect = 1e-99
Identities = 359/421 (85%), Gaps = 15/421 (3%)
Strand = Plus / Plus
Query: 61 tacaggggcactaaattcccagaatgggttggacattcttcctaccacaacatgactgag 120
|||| |||||| ||||| || |||||||||||| ||||||||||||||||||||||
Sbjct: 6 tacatgggcacaaaatttacaaaatgggttggacgttcttcctaccacaacatgacttca 65
Query: 121 ctatatctatgggattgtatgaattgttgtatgcttccttcacttggacaactaccctct 180
||| ||||| ||||||| ||| || || ||||||||||||||||||||||| ||||||
Sbjct: 66 atatgtctatctgattgtaagaactgctgcatgcttccttcacttggacaactgccctct 125
Query: 181 ctcaagacactatatattatccgattgaacggg---------------gttgaatttttg 225
|||||||||||||||||| || |||||||||| ||||||||||||
Sbjct: 126 ctcaagacactatatatttgccaattgaacgggttggagactgttggtgttgaatttttg 185
Query: 226 aagagcgacgattccttttcagggacaccttttccctcccttcacaatctgacatttata 285
|||||||| || ||||||||||||||| ||||||||||||| || |||||||||| |
Sbjct: 186 aagagcgatgaatccttttcagggacatcttttccctccctacaatctctgacatttgaa 245
Query: 286 gacatgccgagttgggaggtgtggcgtccctttgaatcaaatgcctttcctcaactacag 345
||||||||||||||||||||||||||||| || ||||||||||| |||||||||||| ||
Sbjct: 246 gacatgccgagttgggaggtgtggcgtccattcgaatcaaatgcttttcctcaactaaag 305
Query: 346 tacctcagaatagacaactgtcccagattaaggggagatttgccaaataaccttccagct 405
| ||| |||| | | ||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 306 aagctctcaataagctattgtcccagattaaggggagatttgccatataaccttccggct 365
Query: 406 ttggaatcacttgaaattagcagatgtgagcagcttgcttcttctcttccaagggctcct 465
|||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 366 ttggaatcacttgatattagcagttgtgagcagcttgtttcttctcttccaagggctcct 425
Query: 466 g 466
|
Sbjct: 426 g 426
>gnl|LJGI|TC80664 weakly similar to UniRef100_Q2YE88 Cluster: NBS-LRR type disease
resistance protein Rps1-k-1; n=1; Glycine max|Rep:
NBS-LRR type disease resistance protein Rps1-k-1 -
Glycine max (Soybean), partial (21%)
Length = 1338
Score = 143 bits (72), Expect = 2e-33
Identities = 223/271 (82%), Gaps = 8/271 (2%)
Strand = Plus / Plus
Query: 763 agctgtgattctctcacatccctcctgttggagagctttccaaatctccattctctcacg 822
|||||||||||||||| |||||| | |||||||| |||||||||||||| |||||||||
Sbjct: 617 agctgtgattctctcatatcccttcagttggagacctttccaaatctccgttctctcacc 676
Query: 823 atcagaaaccttgaaaatctggaaagtatttcagtac---agggagatgctgc----tct 875
|||| |||| || |||||||||| |||||||||||| | | || | || | |||
Sbjct: 677 atcataaactgtgcaaatctggaacgtatttcagtaccgaatgcaggt-cttcacaatct 735
Query: 876 cacagatttcgtcatagatggctgccccaaatttgtatcattcccaaatgaaggattgtc 935
|||| ||||| ||| ||| |||||||||||||||||||||||||| |||||||||
Sbjct: 736 cacatctttcgagataaatgactgccccaaatttgtatcattcccaatagaaggattgca 795
Query: 936 tgcgcctgcaatgactaaattctctgtctctgattgcaacaagttaaagtcattacctta 995
|||||| ||||| || || |||||| ||||| || ||||||||||||||||||
Sbjct: 796 tgcgcccaacttgactgaaatcgacgtctcttattgcgacgagttaaagtcattaccttg 855
Query: 996 tcacatgagtactcttctcccaaagttagaa 1026
|||||||| ||||||||||||||||||||||
Sbjct: 856 tcacatgaatactcttctcccaaagttagaa 886
Score = 89.7 bits (45), Expect = 3e-17
Identities = 87/101 (86%)
Strand = Plus / Plus
Query: 317 ttgaatcaaatgcctttcctcaactacagtacctcagaatagacaactgtcccagattaa 376
|||| ||||||||||||||||||||| || ||||| ||| | |||||||||||||
Sbjct: 150 ttgagtcaaatgcctttcctcaactaaagcgcctcaccataagtgattgtcccagattaa 209
Query: 377 ggggagatttgccaaataaccttccagctttggaatcactt 417
||||||||||||||| | | |||||||||||||||||||||
Sbjct: 210 ggggagatttgccaactcatcttccagctttggaatcactt 250
>gnl|LJGI|BP066885 weakly similar to UniRef100_A2Q526 Cluster: Leucine Rich Repeat
family protein; n=1; Medicago truncatula|Rep: Leucine
Rich Repeat family protein - Medicago truncatula (Barrel
medic), partial (12%)
Length = 469
Score = 91.7 bits (46), Expect = 8e-18
Identities = 166/206 (80%)
Strand = Plus / Minus
Query: 520 cccatttcggtggaagatctatatatcaaaggaagcgaggtggtggattccatgttggag 579
||||||||||||||||| ||| | |||| ||||||||||| |||||| | ||||| |||
Sbjct: 469 cccatttcggtggaagagctagaaatcagaggaagcgaggcggtggagtttatgtttgag 410
Query: 580 accaccgccatcacccaaccaacttcccttagatctttatctttagggaattgttcagct 639
||| | ||||||||| ||| |||| ||| | |||| | ||| ||||||| ||
Sbjct: 409 gccatcaccatcaccccacccacttgtcttcaaggtttaatgatctggagttgttcatct 350
Query: 640 gtcagatcattcccgggagattgtttacctgcatcactgaagaacttgcgtatcaaggat 699
| | |||||||||||||||||||||||| |||||||| |||| |||| |||| ||||
Sbjct: 349 gccttatcattcccgggagattgtttacccgcatcactcaagagcttgtatatccgggat 290
Query: 700 ttcaggaagctagaatttccaaagca 725
|||||| | |||||||||||||||||
Sbjct: 289 ttcagggaactagaatttccaaagca 264
>gnl|LJGI|BW595042 weakly similar to UniRef100_A2Q529 Cluster: Leucine-rich repeat; n=1;
Medicago truncatula|Rep: Leucine-rich repeat - Medicago
truncatula (Barrel medic), partial (19%)
Length = 486
Score = 54.0 bits (27), Expect = 2e-06
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 953 aattctctgtctctgattgcaacaagttaaagtcattaccttatcacatgagtactcttc 1012
||||||| || ||||||||| |||||||| ||||||| ||| || |||| ||||||||
Sbjct: 395 aattctccgtttctgattgcgacaagttagagtcattgcctcgtcggatgaatactcttc 454
Query: 1013 tcccaaa 1019
|||||||
Sbjct: 455 tcccaaa 461