Miyakogusa Predicted Gene

Lj6g3v1629770.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1629770.1 tr|G7IKX1|G7IKX1_MEDTR Endoribonuclease Dicer
OS=Medicago truncatula GN=MTR_2g030490 PE=4
SV=1,72.22,0.000000000001,no description,NULL; HELICASE-RELATED,NULL;
P-loop containing nucleoside triphosphate
hydrolases,NUL,NODE_57511_length_371_cov_17.010782.path2.1
         (156 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC594538 similar to UniRef100_Q1KL58 Cluster: Dicer-lik...   309   3e-84

>gnl|LJGI|DC594538 similar to UniRef100_Q1KL58 Cluster: Dicer-like 2 spliceform 1;
           n=1; Arabidopsis thaliana|Rep: Dicer-like 2 spliceform 1
           - Arabidopsis thaliana (Mouse-ear cress), partial (4%)
          Length = 317

 Score =  309 bits (156), Expect = 3e-84
 Identities = 156/156 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtggaagaagcgcttccgatggaattggataaccaggtcgttcccgatgctcttcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 atggtggaagaagcgcttccgatggaattggataaccaggtcgttcccgatgctcttcca 176

                                                                       
Query: 61  tttgctagaagctatcagattgaagcgttggataaagcaatccgggaaaataccattgtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 tttgctagaagctatcagattgaagcgttggataaagcaatccgggaaaataccattgtg 236

                                               
Query: 121 tttttggatactggttcgggcaagactttgatagct 156
           ||||||||||||||||||||||||||||||||||||
Sbjct: 237 tttttggatactggttcgggcaagactttgatagct 272