Miyakogusa Predicted Gene
- Lj6g3v1629750.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v1629750.1 Non Chatacterized Hit- tr|F6HLZ3|F6HLZ3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,37.4,0.00000000002,TPR_1,Tetratricopeptide TPR-1; GLL1384
PROTEIN,NULL; TETRATRICOPEPTIDE REPEAT PROTEIN, TPR,NULL; no
,CUFF.59719.1
(1722 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59950 1768 0.0
gnl|LJGI|TC60882 similar to UniRef100_A7Q4Q6 Cluster: Chromosome... 1162 0.0
gnl|LJGI|FS335428 homologue to UniRef100_A7QDV0 Cluster: Chromos... 76 8e-13
>gnl|LJGI|TC59950
Length = 1150
Score = 1768 bits (892), Expect = 0.0
Identities = 912/921 (99%)
Strand = Plus / Plus
Query: 802 cgcgcttcgcaaatgctgatggatatggagtcgtcatcgtcacagtgctctccactaagt 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgcgcttcgcaaatgctgatggatatggagtcgtcatcgtcacagtgctctccactaagt 60
Query: 862 aacttgagtggaaagagctctgacatggttcaaagtaggacacaaaattggtctgtgaca 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aacttgagtggaaagagctctgacatggttcaaagtaggacacaaaattggtctgtgaca 120
Query: 922 tctgagggggaagtatctaatgccaggaggagattgtacgagtcccctgaaccagcaaga 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tctgagggggaagtatctaatgccaggaggagattgtacgagtcccctgaaccagcaaga 180
Query: 982 agagacctgaaggttccttacacaaacacnnnnnnntgttcatggggcttcaataatgga 1041
||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 181 agagacctgaaggttccttacacaaacacaaaaaaatgttcatggggcttcaataatgga 240
Query: 1042 cctcaaagggaaacttggggagatgtccattcagatccaaaaccttcatttgggattcct 1101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cctcaaagggaaacttggggagatgtccattcagatccaaaaccttcatttgggattcct 300
Query: 1102 tctaaacaaaataatttgtctttacctgccaatggaaagtggaatgcgaggacaatggta 1161
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tctacacaaaataatttgtctttacctgccaatggaaagtggaatgcgaggacaatggta 360
Query: 1162 aagcgtgaagataaaacagctattggttctggactatacacttactccaatacagaaaca 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagcgtgaagataaaacagctattggttctggactatacacttactccaatacagaaaca 420
Query: 1222 gatagaaagtttaaagaggacaaatttgctgtagaatcaaatgacatggttgtgaatggt 1281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gatagaaagtttaaagaggacaaatttgctgtagaatcaaatgacatggttgtgaatggt 480
Query: 1282 gccaatcaatttgcaagttctattggcacagaccaaagaagcataaaaccagtggagaag 1341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gccaatcaatttgcaagttctattggcacagaccaaagaagcataaaaccagtggagaag 540
Query: 1342 aagagctgggcagacatagtagaagaagaacaaaatgaagggcatgacttctttggggga 1401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aagagctgggcagacatagtagaagaagaacaaaatgaagggcatgacttctttggggga 600
Query: 1402 tatactagatttgatggtcaggaaggtgctcaagtgtttaataaagaaaatgagaactca 1461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tatactagatttgatggtcaggaaggtgctcaagtgtttaataaagaaaatgagaactca 660
Query: 1462 aacatagtctttcaacgtccttggccgcttagcgagaccaaatgtataagcaaaaagctt 1521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aacatagtctttcaacgtccttggccgcttagcgagaccaaatgtataagcaaaaagctt 720
Query: 1522 gagtccatggacttgaaagatggacatcatggatccggcactgtaactttgtcaaggaag 1581
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 721 gagtccatggacttgaaagatggacatcatggatccggcactgtaattttgtcaaggaag 780
Query: 1582 ccagcagtaaggcgctctctgtgtttcaatcctgaactggcaaaggaaagggattcatca 1641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ccagcagtaaggcgctctctgtgtttcaatcctgaactggcaaaggaaagggattcatca 840
Query: 1642 ttgtctgaggagaagaaaccaccaaggaacaacaggctgcaggttttcaaggatatcgct 1701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ttgtctgaggagaagaaaccaccaaggaacaacaggctgcaggttttcaaggatatcgct 900
Query: 1702 cttcaccctgaaaccccatga 1722
|||||||||||||||||||||
Sbjct: 901 cttcaccctgaaaccccatga 921
>gnl|LJGI|TC60882 similar to UniRef100_A7Q4Q6 Cluster: Chromosome chr10 scaffold_50,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_50, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 795
Score = 1162 bits (586), Expect = 0.0
Identities = 589/590 (99%)
Strand = Plus / Plus
Query: 1 atgccatttgaaagaaactctccggcaaggtgcttcatgacgccaccgccgccgcggctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 atgccatttgaaagaaactctccggcaaggtgcttcatgacgccaccgccgccgcggctt 265
Query: 61 tcttcgtggaggtcgacgccttcacgctctcccatcatgatgccgctttcagagagaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tcttcgtggaggtcgacgccttcacgctctcccatcatgatgccgctttcagagagaaag 325
Query: 121 agatcatcaccgaacaaagatgatccttatcatgtgattcacaaggttcctgctggtgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 agatcatcaccgaacaaagatgatccttatcatgtgattcacaaggttcctgctggtgat 385
Query: 181 tctccctatgttaaagccaagcaggttcagttggtggataaggatcctgggaaagccatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tctccctatgttaaagccaagcaggttcagttggtggataaggatcctgggaaagccatt 445
Query: 241 tcactgttctgggctgcaatcaatgctggggaccgtgtggagagtgctttgaaggatatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tcactgttctgggctgcaatcaatgctggggaccgtgtggagagtgctttgaaggatatg 505
Query: 301 gccttagtcatgaagcaactgaaccgttctgatgaggcaatcgaagctattaaatcattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gccttagtcatgaagcaactgaaccgttctgatgaggcaatcgaagctattaaatcattc 565
Query: 361 cggcatctgtgccctcctgattcccaggaatccctagacaacatcttggttgaactctac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 cggcatctgtgccctcctgattcccaggaatccctagacaacatcttggttgaactctac 625
Query: 421 aagaggtcaggaagggttgatgaagagatttccatgcttcatcacaagttgaagcaaatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 aagaggtcaggaagggttgatgaagagatttccatgcttcatcacaagttgaagcaaatt 685
Query: 481 gaagatggtgtcacttttgtggggaggacaaccaaacaagcaagatcacaagggaagaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gaagatggtgtcacttttgtggggaggacaaccaaacaagcaagatcacaagggaagaag 745
Query: 541 attcatgtaactgctgagcaagagatatcacggatactggggaacttggc 590
|||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 746 attcatgtaactgctgagcaagaggtatcacggatactggggaacttggc 795
>gnl|LJGI|FS335428 homologue to UniRef100_A7QDV0 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 663
Score = 75.8 bits (38), Expect = 8e-13
Identities = 158/198 (79%)
Strand = Plus / Plus
Query: 160 cacaaggttcctgctggtgattctccctatgttaaagccaagcaggttcagttggtggat 219
|||||||| || | ||| ||| |||| ||||||| ||| || | ||||||||||| ||
Sbjct: 216 cacaaggtcccagttggagatactccttatgttagagcaaaaaatgttcagttggttgaa 275
Query: 220 aaggatcctgggaaagccatttcactgttctgggctgcaatcaatgctggggaccgtgtg 279
|||||||| | || ||| ||| ||||||||||||| || || ||||| |||| | |||
Sbjct: 276 aaggatccggagagagcaattccactgttctgggcagccattaatgcagggggtagagtg 335
Query: 280 gagagtgctttgaaggatatggccttagtcatgaagcaactgaaccgttctgatgaggca 339
|| ||||||||||| |||||||| | || |||||||| | ||| || ||||| || ||
Sbjct: 336 gatagtgctttgaaagatatggctattgtgatgaagcagcagaatcgatctgaagaagcc 395
Query: 340 atcgaagctattaaatca 357
|| |||||||||||||||
Sbjct: 396 attgaagctattaaatca 413