Miyakogusa Predicted Gene

Lj6g3v1629690.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v1629690.1 tr|Q9LT74|Q9LT74_ARATH Similarity to late
embryogenesis abundant protein OS=Arabidopsis thaliana
GN=,52.86,0.0000000006,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; Root_cap,Root cap,CUFF.59714.1
         (1113 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV406674 weakly similar to UniRef100_Q9LT74 Cluster: Si...   676   0.0  

>gnl|LJGI|AV406674 weakly similar to UniRef100_Q9LT74 Cluster: Similarity to late
           embryogenesis abundant protein; n=2; Arabidopsis
           thaliana|Rep: Similarity to late embryogenesis abundant
           protein - Arabidopsis thaliana (Mouse-ear cress),
           partial (6%)
          Length = 397

 Score =  676 bits (341), Expect = 0.0
 Identities = 341/341 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcaatgacaattcttcaagttttgttgccaatcctgctggcgatggtggcaggcata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57  atggcaatgacaattcttcaagttttgttgccaatcctgctggcgatggtggcaggcata 116

                                                                       
Query: 61  gcagctgctcctcctactggagaagtctataattacaaatatgggtatgcaacctgcaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 gcagctgctcctcctactggagaagtctataattacaaatatgggtatgcaacctgcaac 176

                                                                       
Query: 121 ataaagaagtacaagtattgttataattggcctcaagagtgccctgcatcttgccctaac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 ataaagaagtacaagtattgttataattggcctcaagagtgccctgcatcttgccctaac 236

                                                                       
Query: 181 aaatgtaaagtggattgtgccacctgcaaacctatctgtgttccgaaagagaaagctaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 aaatgtaaagtggattgtgccacctgcaaacctatctgtgttccgaaagagaaagctaga 296

                                                                       
Query: 241 tgcaagaacaagaaattcactagctgttacaacacagaacatgtttgccctgcttcttgc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tgcaagaacaagaaattcactagctgttacaacacagaacatgtttgccctgcttcttgc 356

                                                    
Query: 301 cctggtgcatgtgaggttgattgcaccacttgcaaaccagt 341
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 cctggtgcatgtgaggttgattgcaccacttgcaaaccagt 397